The Chromosome 7 Annotation Project

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Chromosome 7 Sequence Comparison (CRA_TCAGchr7.v1 vs. NCBI_chr7_b31)

Subject Chromosome									Query Chromosome									Alignment Details
Subject Chromosome	Subject Chromosome Start Coordinate	Subject Chromosome End Coordinate	Subject Component	Subject Component Start Coordinate	Subject Component End Coordinate	Subject Alignment Orientation	Subject Length	Subject Sequence Categorization	Query Chromosome	Query Chromosome Start Coordinate	Query Chromosome End Coordinate	Query Component	Query Component Start Coordinate	Query Component End Coordinate	Query Alignment Orientation	Query Length	Query Sequence Categorization	PatternHunter Alignment Score	PatternHunter Alignment Identity	PatternHunter Alignment Gaps
UNMATCHED	1	1120					1120	UNMATCHED	DELETION	1	1					0	DELETION
GAP	1121	51120					50000	GAP	NO_GAP	1	1					0	NO_GAP
CRA_TCAGchr7.v1:51121-96590	51121	73340	AC097647.2:1-45470|+	1	22220	+	22220		NCBI_chr7_b31:1-22220	1	22220	AC097647.2:1-22220|+	1	22220	+	22220		22220	22220/22220 (100%)	0/22220 (0%)
CRA_TCAGchr7.v1:51121-96590	73341	84263	AC097647.2:1-45470|+	22221	33143	+	10923		NCBI_chr7_b31:22221-33143	22221	33143	AC097645.2:1-10923|+	1	10923	+	10923		10923	10923/10923 (100%)	0/10923 (0%)
CRA_TCAGchr7.v1:51121-96590	84264	96590	AC097647.2:1-45470|+	33144	45470	+	12327		NCBI_chr7_b31:33144-72470	33144	45470	AC097646.2:1-39327|+	1	12327	+	12327		12327	12327/12327 (100%)	0/12327 (0%)
CRA_TCAGchr7.v1:96591-105103	96591	105103	AC112517.1:33129-41641|+	33129	41641	+	8513		NCBI_chr7_b31:33144-72470	45471	53983	AC097646.2:1-39327|+	12328	20840	+	8513		8513	8513/8513 (100%)	0/8513 (0%)
CRA_TCAGchr7.v1:105104-114912	105104	114912	AC097645.2:31764-41572|+	31764	41572	+	9809		NCBI_chr7_b31:33144-72470	53984	63792	AC097646.2:1-39327|+	20841	30649	+	9809		9809	9809/9809 (100%)	0/9809 (0%)
CRA_TCAGchr7.v1:114913-127224	114913	123590	AC097646.2:30650-42961|+	30650	39327	+	8678		NCBI_chr7_b31:33144-72470	63793	72470	AC097646.2:1-39327|+	30650	39327	+	8678		8678	8678/8678 (100%)	0/8678 (0%)
CRA_TCAGchr7.v1:123591-127224	123591	127224					3634		NCBI_chr7_b31:72471-76290	72471	76290					3820
CRA_TCAGchr7.v1:127225-157442	127225	157442	AC093686.6:3821-34038|+	3821	34038	+	30218		NCBI_chr7_b31:72471-106508	76291	106508	AC093686.6:1-34038|+	3821	34038	+	30218		30218	30218/30218 (100%)	0/30218 (0%)
CRA_TCAGchr7.v1:157443-170367	157443	170367	AC093666.4:1-12925|+	1	12925	+	12925		NCBI_chr7_b31:106509-119433	106509	119433	AC093666.4:1-12925|+	1	12925	+	12925		12925	12925/12925 (100%)	0/12925 (0%)
CRA_TCAGchr7.v1:170368-177612	170368	177612	AC093627.4:1-7245|+	1	7245	+	7245		NCBI_chr7_b31:119434-298702	119434	126678	AC093627.4:1-179269|+	1	7245	+	7245		7245	7245/7245 (100%)	0/7245 (0%)
CRA_TCAGchr7.v1:177613-656460	177613	217562	GA_x39G1GC42LN_4:1-478848|+	1	39950	+	39950		NCBI_chr7_b31:119434-298702	126679	166636	AC093627.4:1-179269|+	7246	47203	+	39958		39715	39863/39966 (99%)	24/39966 (0%)
UNMATCHED	217563	217568					6	UNMATCHED	DELETION	166619	166636					0	DELETION
CRA_TCAGchr7.v1:177613-656460	217569	249724	GA_x39G1GC42LN_4:1-478848|+	39957	72112	+	32156		NCBI_chr7_b31:119434-298702	166619	198822	AC093627.4:1-179269|+	47186	79389	+	32204		31679	31981/32218 (99%)	76/32218 (0%)
CRA_TCAGchr7.v1:177613-656460	248984	256073	GA_x39G1GC42LN_4:1-478848|+	71372	78461	+	7090		NCBI_chr7_b31:119434-298702	198504	205629	AC093627.4:1-179269|+	79071	86196	+	7126		6968	7062/7126 (99%)	36/7126 (0%)
DELETION	256068	256073					0	DELETION	UNMATCHED	205630	205721					96	UNMATCHED
CRA_TCAGchr7.v1:177613-656460	256068	263285	GA_x39G1GC42LN_4:1-478848|+	78456	85673	+	7218		NCBI_chr7_b31:119434-298702	205722	212929	AC093627.4:1-179269|+	86289	93496	+	7208		7099	7168/7222 (99%)	18/7222 (0%)
CRA_TCAGchr7.v1:177613-656460	263118	271468	GA_x39G1GC42LN_4:1-478848|+	85506	93856	+	8351		NCBI_chr7_b31:119434-298702	212730	221087	AC093627.4:1-179269|+	93297	101654	+	8358		8240	8307/8359 (99%)	9/8359 (0%)
CRA_TCAGchr7.v1:177613-656460	271343	274939	GA_x39G1GC42LN_4:1-478848|+	93731	97327	+	3597		NCBI_chr7_b31:119434-298702	220917	224514	AC093627.4:1-179269|+	101484	105081	+	3598		3500	3559/3603 (98%)	11/3603 (0%)
CRA_TCAGchr7.v1:177613-656460	274768	286157	GA_x39G1GC42LN_4:1-478848|+	97156	108545	+	11390		NCBI_chr7_b31:119434-298702	224183	235572	AC093627.4:1-179269|+	104750	116139	+	11390		11287	11353/11394 (99%)	8/11394 (0%)
CRA_TCAGchr7.v1:177613-656460	285949	305634	GA_x39G1GC42LN_4:1-478848|+	108337	128022	+	19686		NCBI_chr7_b31:119434-298702	235488	255170	AC093627.4:1-179269|+	116055	135737	+	19683		19549	19637/19690 (99%)	11/19690 (0%)
UNMATCHED	305635	309140					3506	UNMATCHED	DELETION	255136	255170					0	DELETION
CRA_TCAGchr7.v1:177613-656460	309141	310345	GA_x39G1GC42LN_4:1-478848|+	131529	132733	+	1205		NCBI_chr7_b31:119434-298702	255136	256337	AC093627.4:1-179269|+	135703	136904	+	1202		1166	1188/1205 (98%)	3/1205 (0%)
CRA_TCAGchr7.v1:177613-656460	310345	317741	GA_x39G1GC42LN_4:1-478848|+	132733	140129	+	7397		NCBI_chr7_b31:119434-298702	256268	263694	AC093627.4:1-179269|+	136835	144261	+	7427		7212	7331/7430 (98%)	36/7430 (0%)
CRA_TCAGchr7.v1:177613-656460	317636	322264	GA_x39G1GC42LN_4:1-478848|+	140024	144652	+	4629		NCBI_chr7_b31:119434-298702	263505	268153	AC093627.4:1-179269|+	144072	148720	+	4649		4531	4595/4649 (98%)	20/4649 (0%)
CRA_TCAGchr7.v1:177613-656460	321907	337748	GA_x39G1GC42LN_4:1-478848|+	144295	160136	+	15842		NCBI_chr7_b31:119434-298702	267946	283786	AC093627.4:1-179269|+	148513	164353	+	15841		15781	15817/15843 (99%)	3/15843 (0%)
DELETION	337634	337748					0	DELETION	UNMATCHED	283787	283812					139	UNMATCHED
CRA_TCAGchr7.v1:177613-656460	337634	352523	GA_x39G1GC42LN_4:1-478848|+	160022	174911	+	14890		NCBI_chr7_b31:119434-298702	283813	298702	AC093627.4:1-179269|+	164380	179269	+	14890		14854	14872/14890 (99%)	0/14890 (0%)
UNMATCHED	352524	656460					303937	UNMATCHED	DELETION	298702	298703					0	DELETION
GAP	656461	706460					50000	GAP	GAP	298703	348702					50000	GAP
UNMATCHED	706461	779996					73536	UNMATCHED	DELETION	348702	348703					0	DELETION
CRA_TCAGchr7.v1:706461-1189758	779997	921504	GA_x39G1FKSFPU_4:1-483298|+	73537	215044	+	141508		NCBI_chr7_b31:348703-562952	348703	490197	AC099731.5:1-214250|+	1	141495	+	141495		141250	141415/141510 (99%)	17/141510 (0%)
DELETION	921204	921504					0	DELETION	UNMATCHED	490198	493658					3760	UNMATCHED
CRA_TCAGchr7.v1:706461-1189758	921204	974929	GA_x39G1FKSFPU_4:1-483298|+	214744	268469	+	53726		NCBI_chr7_b31:348703-562952	493659	547387	AC099731.5:1-214250|+	144957	198685	+	53729		53457	53637/53742 (99%)	29/53742 (0%)
CRA_TCAGchr7.v1:706461-1189758	974791	976310	GA_x39G1FKSFPU_4:1-483298|+	268331	269850	+	1520		NCBI_chr7_b31:348703-562952	547189	548708	AC099731.5:1-214250|+	198487	200006	+	1520		1492	1506/1520 (99%)	0/1520 (0%)
DELETION	976310	976311					0	DELETION	UNMATCHED	548709	548763					55	UNMATCHED
CRA_TCAGchr7.v1:706461-1189758	976311	978322	GA_x39G1FKSFPU_4:1-483298|+	269851	271862	+	2012		NCBI_chr7_b31:348703-562952	548764	550774	AC099731.5:1-214250|+	200062	202072	+	2011		1961	1989/2012 (98%)	1/2012 (0%)
CRA_TCAGchr7.v1:706461-1189758	978142	980655	GA_x39G1FKSFPU_4:1-483298|+	271682	274195	+	2514		NCBI_chr7_b31:348703-562952	550523	553030	AC099731.5:1-214250|+	201821	204328	+	2508		2396	2473/2515 (98%)	8/2515 (0%)
CRA_TCAGchr7.v1:706461-1189758	980377	990844	GA_x39G1FKSFPU_4:1-483298|+	273917	284384	+	10468		NCBI_chr7_b31:348703-562952	552491	562952	AC099731.5:1-214250|+	203789	214250	+	10462		10357	10433/10469 (99%)	8/10469 (0%)
CRA_TCAGchr7.v1:706461-1189758	990845	1001962	GA_x39G1FKSFPU_4:1-483298|+	284385	295502	+	11118		NCBI_chr7_b31:562953-757156	562953	574074	AC073957.7:1-194204|+	1	11122	+	11122		11056	11099/11122 (99%)	4/11122 (0%)
CRA_TCAGchr7.v1:706461-1189758	1001536	1004139	GA_x39G1FKSFPU_4:1-483298|+	295076	297679	+	2604		NCBI_chr7_b31:562953-757156	574032	576647	AC073957.7:1-194204|+	11080	13695	+	2616		2531	2587/2618 (98%)	16/2618 (0%)
DELETION	1004137	1004139					0	DELETION	UNMATCHED	576648	576668					22	UNMATCHED
CRA_TCAGchr7.v1:706461-1189758	1004137	1020751	GA_x39G1FKSFPU_4:1-483298|+	297677	314291	+	16615		NCBI_chr7_b31:562953-757156	576669	593294	AC073957.7:1-194204|+	13717	30342	+	16626		16484	16575/16626 (99%)	11/16626 (0%)
CRA_TCAGchr7.v1:706461-1189758	1020572	1023043	GA_x39G1FKSFPU_4:1-483298|+	314112	316583	+	2472		NCBI_chr7_b31:562953-757156	593285	595756	AC073957.7:1-194204|+	30333	32804	+	2472		2464	2468/2472 (99%)	0/2472 (0%)
CRA_TCAGchr7.v1:706461-1189758	1022827	1026302	GA_x39G1FKSFPU_4:1-483298|+	316367	319842	+	3476		NCBI_chr7_b31:562953-757156	595630	599105	AC073957.7:1-194204|+	32678	36153	+	3476		3470	3473/3476 (99%)	0/3476 (0%)
UNMATCHED	1026303	1027393					1091	UNMATCHED	DELETION	599102	599105					0	DELETION
CRA_TCAGchr7.v1:706461-1189758	1027394	1036580	GA_x39G1FKSFPU_4:1-483298|+	320934	330120	+	9187		NCBI_chr7_b31:562953-757156	599102	608271	AC073957.7:1-194204|+	36150	45319	+	9170		9083	9145/9187 (99%)	17/9187 (0%)
CRA_TCAGchr7.v1:706461-1189758	1036366	1046477	GA_x39G1FKSFPU_4:1-483298|+	329906	340017	+	10112		NCBI_chr7_b31:562953-757156	608019	618111	AC073957.7:1-194204|+	45067	55159	+	10093		9755	9969/10133 (98%)	61/10133 (0%)
CRA_TCAGchr7.v1:706461-1189758	1045835	1049408	GA_x39G1FKSFPU_4:1-483298|+	339375	342948	+	3574		NCBI_chr7_b31:562953-757156	617805	621370	AC073957.7:1-194204|+	54853	58418	+	3566		3438	3514/3575 (98%)	10/3575 (0%)
DELETION	1049097	1049408					0	DELETION	UNMATCHED	621371	621517					457	UNMATCHED
CRA_TCAGchr7.v1:706461-1189758	1049097	1099621	GA_x39G1FKSFPU_4:1-483298|+	342637	393161	+	50525		NCBI_chr7_b31:562953-757156	621518	672049	AC073957.7:1-194204|+	58566	109097	+	50532		50356	50467/50533 (99%)	9/50533 (0%)
CRA_TCAGchr7.v1:706461-1189758	1099390	1128625	GA_x39G1FKSFPU_4:1-483298|+	392930	422165	+	29236		NCBI_chr7_b31:562953-757156	671861	701049	AC073957.7:1-194204|+	108909	138097	+	29189		28298	28840/29257 (98%)	89/29257 (0%)
CRA_TCAGchr7.v1:706461-1189758	1127899	1139993	GA_x39G1FKSFPU_4:1-483298|+	421439	433533	+	12095		NCBI_chr7_b31:562953-757156	700054	712179	AC073957.7:1-194204|+	137102	149227	+	12126		11612	11929/12146 (98%)	71/12146 (0%)
VARIATION	1139994	1140230					237	VARIATION	VARIATION	712180	712248					69	VARIATION
CRA_TCAGchr7.v1:706461-1189758	1140231	1143720	GA_x39G1FKSFPU_4:1-483298|+	433771	437260	+	3490		NCBI_chr7_b31:562953-757156	712249	715739	AC073957.7:1-194204|+	149297	152787	+	3491		3430	3469/3493 (99%)	5/3493 (0%)
CRA_TCAGchr7.v1:706461-1189758	1143354	1179403	GA_x39G1FKSFPU_4:1-483298|+	436894	472943	+	36050		NCBI_chr7_b31:562953-757156	715522	751578	AC073957.7:1-194204|+	152570	188626	+	36057		35732	35924/36066 (99%)	25/36066 (0%)
CRA_TCAGchr7.v1:706461-1189758	1178607	1184584	GA_x39G1FKSFPU_4:1-483298|+	472147	478124	+	5978		NCBI_chr7_b31:562953-757156	751184	757156	AC073957.7:1-194204|+	188232	194204	+	5973		5725	5875/5985 (98%)	19/5985 (0%)
CRA_TCAGchr7.v1:706461-1189758	1184585	1189758	GA_x39G1FKSFPU_4:1-483298|+	478125	483298	+	5174		NCBI_chr7_b31:757157-861441	757157	762331	AC091729.4:1-104285|+	1	5175	+	5175		5148	5164/5175 (99%)	1/5175 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1189759	1190479	GA_x5HB7VCL7H0_3:3805-3470178|+	3805	4525	+	721		NCBI_chr7_b31:757157-861441	762332	763052	AC091729.4:1-104285|+	5176	5896	+	721		713	717/721 (99%)	0/721 (0%)
CRA_TCAGchr7.v1:1190480-1200777	1190480	1200777					10298		NCBI_chr7_b31:763053-773438	763053	773438					10386
CRA_TCAGchr7.v1:1189759-4656132	1200778	1219596	GA_x5HB7VCL7H0_3:3805-3470178|+	14824	33642	+	18819		NCBI_chr7_b31:757157-861441	773439	792266	AC091729.4:1-104285|+	16283	35110	+	18828		18711	18784/18832 (99%)	17/18832 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1219080	1228013	GA_x5HB7VCL7H0_3:3805-3470178|+	33126	42059	+	8934		NCBI_chr7_b31:757157-861441	791932	800845	AC091729.4:1-104285|+	34776	43689	+	8914		8435	8754/8953 (97%)	58/8953 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1226638	1266646	GA_x5HB7VCL7H0_3:3805-3470178|+	40684	80692	+	40009		NCBI_chr7_b31:757157-861441	800446	840469	AC091729.4:1-104285|+	43290	83313	+	40024		39618	39871/40034 (99%)	35/40034 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1266303	1269719	GA_x5HB7VCL7H0_3:3805-3470178|+	80349	83765	+	3417		NCBI_chr7_b31:757157-861441	840314	843727	AC091729.4:1-104285|+	83158	86571	+	3414		3311	3376/3421 (98%)	11/3421 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1269455	1281516	GA_x5HB7VCL7H0_3:3805-3470178|+	83501	95562	+	12062		NCBI_chr7_b31:757157-861441	843668	855718	AC091729.4:1-104285|+	86512	98562	+	12051		11524	11846/12108 (97%)	103/12108 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1281282	1287213	GA_x5HB7VCL7H0_3:3805-3470178|+	95328	101259	+	5932		NCBI_chr7_b31:757157-861441	855507	861441	AC091729.4:1-104285|+	98351	104285	+	5935		5808	5888/5938 (99%)	9/5938 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1287214	1339395	GA_x5HB7VCL7H0_3:3805-3470178|+	101260	153441	+	52182		NCBI_chr7_b31:861442-1030596	861442	913615	AC073094.11:17972-187126|+	17972	70145	+	52174		51779	52043/52197 (99%)	38/52197 (0%)
VARIATION	1339396	1343107					3712	VARIATION	VARIATION	913616	917504					3889	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	1343108	1345591	GA_x5HB7VCL7H0_3:3805-3470178|+	157154	159637	+	2484		NCBI_chr7_b31:861442-1030596	917505	919992	AC073094.11:17972-187126|+	74035	76522	+	2488		2398	2453/2488 (98%)	4/2488 (0%)
VARIATION	1345592	1346181					590	VARIATION	VARIATION	919993	920881					889	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	1346182	1370949	GA_x5HB7VCL7H0_3:3805-3470178|+	160228	184995	+	24768		NCBI_chr7_b31:861442-1030596	920882	945664	AC073094.11:17972-187126|+	77412	102194	+	24783		24393	24617/24791 (99%)	31/24791 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1370458	1376334	GA_x5HB7VCL7H0_3:3805-3470178|+	184504	190380	+	5877		NCBI_chr7_b31:861442-1030596	945195	951074	AC073094.11:17972-187126|+	101725	107604	+	5880		5790	5850/5885 (99%)	13/5885 (0%)
UNMATCHED	1376335	1376786					452	UNMATCHED	DELETION	950760	951074					0	DELETION
CRA_TCAGchr7.v1:1189759-4656132	1376787	1383179	GA_x5HB7VCL7H0_3:3805-3470178|+	190833	197225	+	6393		NCBI_chr7_b31:861442-1030596	950760	957152	AC073094.11:17972-187126|+	107290	113682	+	6393		6305	6349/6393 (99%)	0/6393 (0%)
VARIATION	1383180	1383329					150	VARIATION	VARIATION	957153	957815					663	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	1383330	1390280	GA_x5HB7VCL7H0_3:3805-3470178|+	197376	204326	+	6951		NCBI_chr7_b31:861442-1030596	957816	964781	AC073094.11:17972-187126|+	114346	121311	+	6966		6654	6828/6972 (97%)	27/6972 (0%)
CRA_TCAGchr7.v1:1390281-1392802	1390281	1392802					2522		NCBI_chr7_b31:964782-967641	964782	967641					2860
CRA_TCAGchr7.v1:1189759-4656132	1392803	1412927	GA_x5HB7VCL7H0_3:3805-3470178|+	206849	226973	+	20125		NCBI_chr7_b31:861442-1030596	967642	987777	AC073094.11:17972-187126|+	124172	144307	+	20136		19967	20060/20138 (99%)	15/20138 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1412734	1429288	GA_x5HB7VCL7H0_3:3805-3470178|+	226780	243334	+	16555		NCBI_chr7_b31:861442-1030596	987654	1004195	AC073094.11:17972-187126|+	144184	160725	+	16542		16268	16427/16556 (99%)	15/16556 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1428236	1446278	GA_x5HB7VCL7H0_3:3805-3470178|+	242282	260324	+	18043		NCBI_chr7_b31:861442-1030596	1003484	1021541	AC073094.11:17972-187126|+	160014	178071	+	18058		17746	17939/18062 (99%)	23/18062 (0%)
VARIATION	1446279	1446353					75	VARIATION	VARIATION	1021542	1021614					73	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	1446354	1455335	GA_x5HB7VCL7H0_3:3805-3470178|+	260400	269381	+	8982		NCBI_chr7_b31:861442-1030596	1021615	1030596	AC073094.11:17972-187126|+	178145	187126	+	8982		8910	8946/8982 (99%)	0/8982 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1455336	1598109	GA_x5HB7VCL7H0_3:3805-3470178|+	269382	412155	+	142774		NCBI_chr7_b31:1030597-1177592	1030597	1173357	AC102953.5:1-146996|+	1	142761	+	142761		142525	142714/142783 (99%)	31/142783 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1598110	1602395	GA_x5HB7VCL7H0_3:3805-3470178|+	412156	416441	+	4286		NCBI_chr7_b31:1030597-1177592	1173307	1177592	AC102953.5:1-146996|+	142711	146996	+	4286		4280	4283/4286 (99%)	0/4286 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1602396	1673377	GA_x5HB7VCL7H0_3:3805-3470178|+	416442	487423	+	70982		NCBI_chr7_b31:1177593-1289677	1177593	1248575	AC093734.3:1-112085|+	1	70983	+	70983		70890	70939/70983 (99%)	1/70983 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1673135	1714463	GA_x5HB7VCL7H0_3:3805-3470178|+	487181	528509	+	41329		NCBI_chr7_b31:1177593-1289677	1248353	1289677	AC093734.3:1-112085|+	70761	112085	+	41325		41250	41300/41330 (99%)	6/41330 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1714464	1783853	GA_x5HB7VCL7H0_3:3805-3470178|+	528510	597899	+	69390		NCBI_chr7_b31:1289678-1483459	1289678	1359070	AC074389.8:1-193782|+	1	69393	+	69393		69079	69261/69398 (99%)	13/69398 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1783854	1867489	GA_x5HB7VCL7H0_3:3805-3470178|+	597900	681535	+	83636		NCBI_chr7_b31:1289678-1483459	1359040	1442679	AC074389.8:1-193782|+	69363	153002	+	83640		83380	83554/83653 (99%)	30/83653 (0%)
UNMATCHED	1867490	1867637					148	UNMATCHED	DELETION	1442356	1442679					0	DELETION
CRA_TCAGchr7.v1:1189759-4656132	1867638	1908757	GA_x5HB7VCL7H0_3:3805-3470178|+	681684	722803	+	41120		NCBI_chr7_b31:1289678-1483459	1442356	1483459	AC074389.8:1-193782|+	152679	193782	+	41104		40897	41036/41130 (99%)	36/41130 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1908758	1951751	GA_x5HB7VCL7H0_3:3805-3470178|+	722804	765797	+	42994		NCBI_chr7_b31:1483460-1526444	1483460	1526444	AC110781.3:1-42985|+	1	42985	+	42985		42761	42893/42995 (99%)	11/42995 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1951752	1954983	GA_x5HB7VCL7H0_3:3805-3470178|+	765798	769029	+	3232		NCBI_chr7_b31:1526445-1589633	1526445	1529674	AC104129.4:1-63189|+	1	3230	+	3230		3169	3203/3232 (99%)	2/3232 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1954723	1969727	GA_x5HB7VCL7H0_3:3805-3470178|+	768769	783773	+	15005		NCBI_chr7_b31:1526445-1589633	1529544	1544524	AC104129.4:1-63189|+	3100	18080	+	14981		14704	14871/15008 (99%)	30/15008 (0%)
VARIATION	1969728	1970724					997	VARIATION	VARIATION	1544525	1545402					878	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	1970725	1980774	GA_x5HB7VCL7H0_3:3805-3470178|+	784771	794820	+	10050		NCBI_chr7_b31:1526445-1589633	1545403	1555452	AC104129.4:1-63189|+	18959	29008	+	10050		9736	9915/10054 (98%)	8/10054 (0%)
CRA_TCAGchr7.v1:1189759-4656132	1979531	2013415	GA_x5HB7VCL7H0_3:3805-3470178|+	793577	827461	+	33885		NCBI_chr7_b31:1526445-1589633	1554259	1588145	AC104129.4:1-63189|+	27815	61701	+	33887		33612	33773/33894 (99%)	16/33894 (0%)
DELETION	2013385	2013415					0	DELETION	UNMATCHED	1588146	1589633					1517	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	2013385	2037915	GA_x5HB7VCL7H0_3:3805-3470178|+	827431	851961	+	24531		NCBI_chr7_b31:1589634-1735336	1589634	1614143	AC069288.7:1-145703|+	1	24510	+	24510		24275	24436/24537 (99%)	33/24537 (0%)
CRA_TCAGchr7.v1:2037916-2038350	2037916	2038350					435		NCBI_chr7_b31:1614144-1615163	1614144	1615163					1020
CRA_TCAGchr7.v1:1189759-4656132	2038351	2045318	GA_x5HB7VCL7H0_3:3805-3470178|+	852397	859364	+	6968		NCBI_chr7_b31:1589634-1735336	1615164	1622131	AC069288.7:1-145703|+	25531	32498	+	6968		6938	6953/6968 (99%)	0/6968 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2044813	2098333	GA_x5HB7VCL7H0_3:3805-3470178|+	858859	912379	+	53521		NCBI_chr7_b31:1589634-1735336	1621842	1675392	AC069288.7:1-145703|+	32209	85759	+	53551		53021	53339/53567 (99%)	62/53567 (0%)
DELETION	2097652	2098333					0	DELETION	UNMATCHED	1675393	1675550					838	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	2097652	2102478	GA_x5HB7VCL7H0_3:3805-3470178|+	911698	916524	+	4827		NCBI_chr7_b31:1589634-1735336	1675551	1680376	AC069288.7:1-145703|+	85918	90743	+	4826		4768	4803/4828 (99%)	3/4828 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2102244	2141868	GA_x5HB7VCL7H0_3:3805-3470178|+	916290	955914	+	39625		NCBI_chr7_b31:1589634-1735336	1680106	1719728	AC069288.7:1-145703|+	90473	130095	+	39623		39431	39553/39635 (99%)	22/39635 (0%)
DELETION	2141378	2141868					0	DELETION	UNMATCHED	1719729	1719897					658	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	2141378	2156809	GA_x5HB7VCL7H0_3:3805-3470178|+	955424	970855	+	15432		NCBI_chr7_b31:1589634-1735336	1719898	1735336	AC069288.7:1-145703|+	130265	145703	+	15439		15401	15425/15439 (99%)	7/15439 (0%)
CRA_TCAGchr7.v1:2156810-2163429	2156810	2163429					6620		NCBI_chr7_b31:1735337-1742366	1735337	1742366					7030
CRA_TCAGchr7.v1:1189759-4656132	2163430	2248410	GA_x5HB7VCL7H0_3:3805-3470178|+	977476	1062456	+	84981		NCBI_chr7_b31:1735337-1827332	1742367	1827332	AC006433.18:1-91996|+	7031	91996	+	84966		84813	84916/84984 (99%)	21/84984 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2248411	2266221	GA_x5HB7VCL7H0_3:3805-3470178|+	1062457	1080267	+	17811		NCBI_chr7_b31:1827333-1925351	1827333	1845143	AC005282.4:201-98219|-	80409	98219	+	17811		17795	17803/17811 (99%)	0/17811 (0%)
UNMATCHED	2266222	2266278					57	UNMATCHED	DELETION	1845112	1845143					0	DELETION
CRA_TCAGchr7.v1:1189759-4656132	2266279	2315668	GA_x5HB7VCL7H0_3:3805-3470178|+	1080325	1129714	+	49390		NCBI_chr7_b31:1827333-1925351	1845112	1894504	AC005282.4:201-98219|-	31048	80440	+	49393		49307	49369/49396 (99%)	9/49396 (0%)
DELETION	2315578	2315668					0	DELETION	UNMATCHED	1894505	1894505					90	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	2315578	2346425	GA_x5HB7VCL7H0_3:3805-3470178|+	1129624	1160471	+	30848		NCBI_chr7_b31:1827333-1925351	1894506	1925351	AC005282.4:201-98219|-	201	31046	+	30846		30821	30837/30848 (99%)	2/30848 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2346426	2384260	GA_x5HB7VCL7H0_3:3805-3470178|+	1160472	1198306	+	37835		NCBI_chr7_b31:1925352-2048404	1925352	1963191	AC004971.3:201-123253|-	85414	123253	+	37840		37591	37756/37856 (99%)	37/37856 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2383673	2421303	GA_x5HB7VCL7H0_3:3805-3470178|+	1197719	1235349	+	37631		NCBI_chr7_b31:1925352-2048404	1962851	2000493	AC004971.3:201-123253|-	48112	85754	+	37643		36942	37364/37686 (99%)	98/37686 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2419657	2468878	GA_x5HB7VCL7H0_3:3805-3470178|+	1233703	1282924	+	49222		NCBI_chr7_b31:1925352-2048404	1999169	2048404	AC004971.3:201-123253|-	201	49436	+	49236		48528	48964/49285 (99%)	112/49285 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2468879	2482908	GA_x5HB7VCL7H0_3:3805-3470178|+	1282925	1296954	+	14030		NCBI_chr7_b31:2048405-2195801	2048405	2062426	AC004840.4:2001-149397|-	135376	149397	+	14022		13860	13961/14032 (99%)	12/14032 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2481951	2598383	GA_x5HB7VCL7H0_3:3805-3470178|+	1295997	1412429	+	116433		NCBI_chr7_b31:2048405-2195801	2061668	2178079	AC004840.4:2001-149397|-	19723	136134	+	116412		116085	116301/116442 (99%)	39/116442 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2598261	2616068	GA_x5HB7VCL7H0_3:3805-3470178|+	1412307	1430114	+	17808		NCBI_chr7_b31:2048405-2195801	2177991	2195801	AC004840.4:2001-149397|-	2001	19811	+	17811		17754	17788/17812 (99%)	5/17812 (0%)
CRA_TCAGchr7.v1:2616069-2618737	2616069	2618737					2669		NCBI_chr7_b31:2195802-2198502	2195802	2198502					2701
CRA_TCAGchr7.v1:1189759-4656132	2618738	2705479	GA_x5HB7VCL7H0_3:3805-3470178|+	1432784	1519525	+	86742		NCBI_chr7_b31:2195802-2285236	2198503	2285236	AC092488.3:1-89435|+	2702	89435	+	86734		85463	86237/86876 (99%)	276/86876 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2705480	2736007	GA_x5HB7VCL7H0_3:3805-3470178|+	1519526	1550053	+	30528		NCBI_chr7_b31:2285237-2334784	2285237	2315770	AC073462.8:201-49748|-	19215	49748	+	30534		30280	30442/30549 (99%)	36/30549 (0%)
UNMATCHED	2736008	2736370					363	UNMATCHED	DELETION	2315740	2315770					0	DELETION
CRA_TCAGchr7.v1:1189759-4656132	2736371	2755453	GA_x5HB7VCL7H0_3:3805-3470178|+	1550417	1569499	+	19083		NCBI_chr7_b31:2285237-2334784	2315740	2334784	AC073462.8:201-49748|-	201	19245	+	19045		18817	18972/19087 (99%)	46/19087 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2755454	2932604	GA_x5HB7VCL7H0_3:3805-3470178|+	1569500	1746650	+	177151		NCBI_chr7_b31:2334785-2545192	2334785	2511938	AC006028.3:201-210608|-	33455	210608	+	177154		176486	176923/177210 (99%)	115/177210 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2917322	2965850	GA_x5HB7VCL7H0_3:3805-3470178|+	1731368	1779896	+	48529		NCBI_chr7_b31:2334785-2545192	2496661	2545192	AC006028.3:201-210608|-	201	48732	+	48532		48164	48396/48548 (99%)	35/48548 (0%)
CRA_TCAGchr7.v1:1189759-4656132	2965851	3061603	GA_x5HB7VCL7H0_3:3805-3470178|+	1779897	1875649	+	95753		NCBI_chr7_b31:2545193-2640941	2545193	2640941	AC004906.3:2001-97749|-	2001	97749	+	95749		95202	95571/95790 (99%)	78/95790 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3061604	3087448	GA_x5HB7VCL7H0_3:3805-3470178|+	1875650	1901494	+	25845		NCBI_chr7_b31:2640942-2666788	2640942	2666788	AC092689.2:2000-27846|-	2000	27846	+	25847		25803	25830/25847 (99%)	2/25847 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3087449	3261696	GA_x5HB7VCL7H0_3:3805-3470178|+	1901495	2075742	+	174248		NCBI_chr7_b31:2666789-2841071	2666789	2841071	AC024028.10:1-174283|+	1	174283	+	174283		173276	173896/174326 (99%)	121/174326 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3261697	3268774	GA_x5HB7VCL7H0_3:3805-3470178|+	2075743	2082820	+	7078		NCBI_chr7_b31:2841072-2848157	2841072	2848155	AC091801.4:1-7086|+	1	7084	+	7084		7010	7055/7085 (99%)	8/7085 (0%)
VARIATION	3268775	3268776					2	VARIATION	VARIATION	2848156	2848157					2	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	3268777	3342136	GA_x5HB7VCL7H0_3:3805-3470178|+	2082823	2156182	+	73360		NCBI_chr7_b31:2848158-2995088	2848158	2921509	AC073316.6:1-146931|+	1	73352	+	73352		72806	73156/73376 (99%)	40/73376 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3342103	3403829	GA_x5HB7VCL7H0_3:3805-3470178|+	2156149	2217875	+	61727		NCBI_chr7_b31:2848158-2995088	2921509	2983253	AC073316.6:1-146931|+	73352	135096	+	61745		61484	61641/61753 (99%)	34/61753 (0%)
DELETION	3403808	3403829					0	DELETION	UNMATCHED	2983254	2983259					26	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	3403808	3415642	GA_x5HB7VCL7H0_3:3805-3470178|+	2217854	2229688	+	11835		NCBI_chr7_b31:2848158-2995088	2983260	2995088	AC073316.6:1-146931|+	135103	146931	+	11829		11661	11777/11848 (99%)	32/11848 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3415643	3468034	GA_x5HB7VCL7H0_3:3805-3470178|+	2229689	2282080	+	52392		NCBI_chr7_b31:2995089-3047484	2995089	3047484	AC092427.2:1-52396|+	1	52396	+	52396		52065	52286/52417 (99%)	46/52417 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3468035	3624958	GA_x5HB7VCL7H0_3:3805-3470178|+	2282081	2439004	+	156924		NCBI_chr7_b31:3047485-3204402	3047485	3204402	AC069286.7:201-157118|-	201	157118	+	156918		156767	156863/156929 (99%)	16/156929 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3624959	3667463	GA_x5HB7VCL7H0_3:3805-3470178|+	2439005	2481509	+	42505		NCBI_chr7_b31:3204403-3291249	3204403	3246904	AC079231.6:201-87047|-	44546	87047	+	42502		42410	42468/42506 (99%)	5/42506 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3667452	3686777	GA_x5HB7VCL7H0_3:3805-3470178|+	2481498	2500823	+	19326		NCBI_chr7_b31:3204403-3291249	3246869	3266187	AC079231.6:201-87047|-	25263	44581	+	19319		19183	19272/19326 (99%)	7/19326 (0%)
DELETION	3686599	3686777					0	DELETION	UNMATCHED	3266188	3266324					314	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	3686599	3711534	GA_x5HB7VCL7H0_3:3805-3470178|+	2500645	2525580	+	24936		NCBI_chr7_b31:3204403-3291249	3266325	3291249	AC079231.6:201-87047|-	201	25125	+	24925		24765	24870/24940 (99%)	19/24940 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3711535	3804279	GA_x5HB7VCL7H0_3:3805-3470178|+	2525581	2618325	+	92745		NCBI_chr7_b31:3291250-3384008	3291250	3384008	AC011284.3:201-92959|-	201	92959	+	92759		92519	92662/92760 (99%)	16/92760 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3804277	3812999	GA_x5HB7VCL7H0_3:3805-3470178|+	2618323	2627045	+	8723		NCBI_chr7_b31:3384009-3533573	3384009	3392730	AC004984.1:201-149765|-	141044	149765	+	8722		8716	8722/8723 (99%)	1/8723 (0%)
CRA_TCAGchr7.v1:3813000-3910587	3813000	3910587					97588		NCBI_chr7_b31:3392731-3490344	3392731	3490344					97614
CRA_TCAGchr7.v1:1189759-4656132	3910588	3953823	GA_x5HB7VCL7H0_3:3805-3470178|+	2724634	2767869	+	43236		NCBI_chr7_b31:3384009-3533573	3490345	3533573	AC004984.1:201-149765|-	201	43429	+	43229		43100	43178/43236 (99%)	7/43236 (0%)
CRA_TCAGchr7.v1:1189759-4656132	3953824	4052532	GA_x5HB7VCL7H0_3:3805-3470178|+	2767870	2866578	+	98709		NCBI_chr7_b31:3533574-3632308	3533574	3632308	AC004935.1:201-98935|-	201	98935	+	98735		98200	98529/98753 (99%)	62/98753 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4052533	4067789	GA_x5HB7VCL7H0_3:3805-3470178|+	2866579	2881835	+	15257		NCBI_chr7_b31:3632309-3758946	3632309	3647573	AC015968.4:2001-128638|-	113374	128638	+	15265		15084	15193/15272 (99%)	22/15272 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4067052	4081167	GA_x5HB7VCL7H0_3:3805-3470178|+	2881098	2895213	+	14116		NCBI_chr7_b31:3632309-3758946	3647324	3661445	AC015968.4:2001-128638|-	99502	113623	+	14122		13883	14032/14141 (99%)	44/14141 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4079786	4178805	GA_x5HB7VCL7H0_3:3805-3470178|+	2893832	2992851	+	99020		NCBI_chr7_b31:3632309-3758946	3659903	3758946	AC015968.4:2001-128638|-	2001	101044	+	99044		98727	98935/99073 (99%)	82/99073 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4178806	4199206	GA_x5HB7VCL7H0_3:3805-3470178|+	2992852	3013252	+	20401		NCBI_chr7_b31:3758947-3804308	3758947	3779342	AC073550.14:1-45362|+	1	20396	+	20396		20301	20362/20408 (99%)	19/20408 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4198964	4224145	GA_x5HB7VCL7H0_3:3805-3470178|+	3013010	3038191	+	25182		NCBI_chr7_b31:3758947-3804308	3779127	3804308	AC073550.14:1-45362|+	20181	45362	+	25182		25166	25174/25182 (99%)	0/25182 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4224146	4233243	GA_x5HB7VCL7H0_3:3805-3470178|+	3038192	3047289	+	9098		NCBI_chr7_b31:3804309-3958952	3804309	3813436	AC017000.5:1-154644|+	1	9128	+	9128		8942	9040/9128 (99%)	30/9128 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4232414	4243524	GA_x5HB7VCL7H0_3:3805-3470178|+	3046460	3057570	+	11111		NCBI_chr7_b31:3804309-3958952	3812535	3823657	AC017000.5:1-154644|+	8227	19349	+	11123		10897	11021/11125 (99%)	16/11125 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4243212	4248219	GA_x5HB7VCL7H0_3:3805-3470178|+	3057258	3062265	+	5008		NCBI_chr7_b31:3804309-3958952	3823451	3828458	AC017000.5:1-154644|+	19143	24150	+	5008		4834	4921/5008 (98%)	0/5008 (0%)
DELETION	4248211	4248219					0	DELETION	UNMATCHED	3828459	3828474					23	UNMATCHED
CRA_TCAGchr7.v1:1189759-4656132	4248211	4261202	GA_x5HB7VCL7H0_3:3805-3470178|+	3062257	3075248	+	12992		NCBI_chr7_b31:3804309-3958952	3828475	3841465	AC017000.5:1-154644|+	24167	37157	+	12991		12850	12929/12993 (99%)	3/12993 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4261083	4321131	GA_x5HB7VCL7H0_3:3805-3470178|+	3075129	3135177	+	60049		NCBI_chr7_b31:3804309-3958952	3841444	3901489	AC017000.5:1-154644|+	37136	97181	+	60046		59918	59986/60049 (99%)	3/60049 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4320587	4367538	GA_x5HB7VCL7H0_3:3805-3470178|+	3134633	3181584	+	46952		NCBI_chr7_b31:3804309-3958952	3901115	3948064	AC017000.5:1-154644|+	96807	143756	+	46950		46640	46818/46956 (99%)	10/46956 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4366824	4378141	GA_x5HB7VCL7H0_3:3805-3470178|+	3180870	3192187	+	11318		NCBI_chr7_b31:3804309-3958952	3947636	3958951	AC017000.5:1-154644|+	143328	154643	+	11316		11041	11229/11327 (99%)	20/11327 (0%)
VARIATION	4378142	4378143					2	VARIATION	VARIATION	3958952	3958952					1	VARIATION
CRA_TCAGchr7.v1:1189759-4656132	4378144	4554822	GA_x5HB7VCL7H0_3:3805-3470178|+	3192190	3368868	+	176679		NCBI_chr7_b31:3958953-4135681	3958953	4135681	AC004887.2:1-176729|+	1	176729	+	176729		175981	176439/176757 (99%)	106/176757 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4554823	4633940	GA_x5HB7VCL7H0_3:3805-3470178|+	3368869	3447986	+	79118		NCBI_chr7_b31:4135682-4214799	4135682	4214799	AC016898.6:1-79118|+	1	79118	+	79118		78711	78975/79139 (99%)	42/79139 (0%)
CRA_TCAGchr7.v1:1189759-4656132	4633941	4656132	GA_x5HB7VCL7H0_3:3805-3470178|+	3447987	3470178	+	22192		NCBI_chr7_b31:4214800-4236987	4214800	4236987	AC104060.4:1-22188|+	1	22188	+	22188		22126	22169/22192 (99%)	4/22192 (0%)
CRA_TCAGchr7.v1:4656133-4808169	4656133	4808169	AC072054.10:1-152037|+	1	152037	+	152037		NCBI_chr7_b31:4236988-4389024	4236988	4389024	AC072054.10:1-152037|+	1	152037	+	152037		152037	152037/152037 (100%)	0/152037 (0%)
CRA_TCAGchr7.v1:4808170-4847992	4808170	4847992	AC092428.4:1-39823|+	1	39823	+	39823		NCBI_chr7_b31:4389025-4428847	4389025	4428847	AC092428.4:1-39823|+	1	39823	+	39823		39823	39823/39823 (100%)	0/39823 (0%)
CRA_TCAGchr7.v1:4847993-5008010	4847993	5008010	AC092610.1:1-160018|+	1	160018	+	160018		NCBI_chr7_b31:4428848-4588865	4428848	4588865	AC092610.1:1-160018|+	1	160018	+	160018		160018	160018/160018 (100%)	0/160018 (0%)
CRA_TCAGchr7.v1:5008011-5030248	5008011	5030248	AC053546.8:1-22238|+	1	22238	+	22238		NCBI_chr7_b31:4588866-4611103	4588866	4611103	AC053546.8:1-22238|+	1	22238	+	22238		22238	22238/22238 (100%)	0/22238 (0%)
CRA_TCAGchr7.v1:5030249-5206646	5030249	5204646	AC092032.5:1-176398|+	1	174398	+	174398		NCBI_chr7_b31:4611104-4785501	4611104	4785501	AC092032.5:1-174398|+	1	174398	+	174398		174398	174398/174398 (100%)	0/174398 (0%)
CRA_TCAGchr7.v1:5030249-5206646	5204647	5206646	AC092032.5:1-176398|+	174399	176398	+	2000		NCBI_chr7_b31:4785502-4861668	4785502	4787501	AC092028.4:1-76167|+	1	2000	+	2000		2000	2000/2000 (100%)	0/2000 (0%)
CRA_TCAGchr7.v1:5206647-5282813	5206647	5280813	AC092028.4:2001-78167|+	2001	76167	+	74167		NCBI_chr7_b31:4785502-4861668	4787502	4861668	AC092028.4:1-76167|+	2001	76167	+	74167		74167	74167/74167 (100%)	0/74167 (0%)
CRA_TCAGchr7.v1:5206647-5282813	5280814	5282813	AC092028.4:2001-78167|+	76168	78167	+	2000		NCBI_chr7_b31:4861669-5035831	4861669	4863668	AC093376.5:1-174163|+	1	2000	+	2000		2000	2000/2000 (100%)	0/2000 (0%)
CRA_TCAGchr7.v1:5282814-5456975	5282814	5454976	AC093376.5:2001-176162|+	2001	174163	+	172163		NCBI_chr7_b31:4861669-5035831	4863669	5035831	AC093376.5:1-174163|+	2001	174163	+	172163		172163	172163/172163 (100%)	0/172163 (0%)
CRA_TCAGchr7.v1:5282814-5456975	5454977	5456975	AC093376.5:2001-176162|+	174164	176162	+	1999		NCBI_chr7_b31:5035832-5105014	5035832	5037831	AC093620.3:1-69183|+	1	2000	+	2000		1991	1998/2000 (99%)	1/2000 (0%)
CRA_TCAGchr7.v1:5456976-5526158	5456976	5524158	AC093620.3:2001-71183|+	2001	69183	+	67183		NCBI_chr7_b31:5035832-5105014	5037832	5105014	AC093620.3:1-69183|+	2001	69183	+	67183		67183	67183/67183 (100%)	0/67183 (0%)
CRA_TCAGchr7.v1:5456976-5526158	5524159	5526158	AC093620.3:2001-71183|+	69184	71183	+	2000		NCBI_chr7_b31:5105015-5188146	5105015	5107014	AC092171.4:1-83132|+	1	2000	+	2000		1998	1999/2000 (99%)	0/2000 (0%)
CRA_TCAGchr7.v1:5526159-5609290	5526159	5607290	AC092171.4:2001-85132|+	2001	83132	+	81132		NCBI_chr7_b31:5105015-5188146	5107015	5188146	AC092171.4:1-83132|+	2001	83132	+	81132		81132	81132/81132 (100%)	0/81132 (0%)
CRA_TCAGchr7.v1:5526159-5609290	5607291	5609290	AC092171.4:2001-85132|+	83133	85132	+	2000		NCBI_chr7_b31:5188147-5382562	5188147	5190155	AC006483.3:2001-196416|-	194408	196416	+	2009		1980	1997/2009 (99%)	9/2009 (0%)
CRA_TCAGchr7.v1:5609291-5803697	5609291	5801697	AC006483.3:1-194407|-	2001	194407	+	192407		NCBI_chr7_b31:5188147-5382562	5190156	5382562	AC006483.3:2001-196416|-	2001	194407	+	192407		192407	192407/192407 (100%)	0/192407 (0%)
CRA_TCAGchr7.v1:5609291-5803697	5801698	5803697	AC006483.3:1-194407|-	1	2000	+	2000		NCBI_chr7_b31:5382563-5522925	5382563	5384562	AC008167.5:2001-142363|-	140364	142363	+	2000		1996	1998/2000 (99%)	0/2000 (0%)
CRA_TCAGchr7.v1:5803698-5944060	5803698	5942060	AC008167.5:1-140363|-	2001	140363	+	138363		NCBI_chr7_b31:5382563-5522925	5384563	5522925	AC008167.5:2001-142363|-	2001	140363	+	138363		138363	138363/138363 (100%)	0/138363 (0%)
CRA_TCAGchr7.v1:5803698-5944060	5942061	5944060	AC008167.5:1-140363|-	1	2000	+	2000		NCBI_chr7_b31:5522926-5647546	5522926	5524925	AC004983.3:201-124821|-	122822	124821	+	2000		1994	1997/2000 (99%)	0/2000 (0%)
CRA_TCAGchr7.v1:5944061-6066881	5944061	6066681	AC004983.2:2001-124821|+	2001	124621	+	122621		NCBI_chr7_b31:5522926-5647546	5524926	5647546	AC004983.3:201-124821|-	201	122821	+	122621		122621	122621/122621 (100%)	0/122621 (0%)
CRA_TCAGchr7.v1:6066682-6066881	6066682	6066881					200		NCBI_chr7_b31:5647547-5647746	5647547	5647746					200
CRA_TCAGchr7.v1:6066882-6146691	6066882	6146491	AC005995.3:1-79810|-	201	79810	+	79610		NCBI_chr7_b31:5647547-5727356	5647747	5727356	AC005995.3:201-80010|-	201	79810	+	79610		79610	79610/79610 (100%)	0/79610 (0%)
CRA_TCAGchr7.v1:6066882-6146691	6146492	6146691	AC005995.3:1-79810|-	1	200	+	200		NCBI_chr7_b31:5727357-5878283	5727357	5727556	AC004895.2:2001-152927|-	152728	152927	+	200		200	200/200 (100%)	0/200 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6146692	6297430	GA_x5HB7VCL73F_3:56781-716446|+	56781	207519	+	150739		NCBI_chr7_b31:5727357-5878283	5727557	5878283	AC004895.2:2001-152927|-	2001	152727	+	150727		150473	150656/150754 (99%)	42/150754 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6297431	6330979	GA_x5HB7VCL73F_3:56781-716446|+	207520	241068	+	33549		NCBI_chr7_b31:5878284-5911833	5878284	5911833	AC092439.4:1-33550|+	1	33550	+	33550		33537	33546/33550 (99%)	1/33550 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6330980	6508297	GA_x5HB7VCL73F_3:56781-716446|+	241069	418386	+	177318		NCBI_chr7_b31:5911834-6124460	5911834	6089153	AC009412.6:1-212627|+	1	177320	+	177320		176923	177202/177341 (99%)	44/177341 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6508248	6510959	GA_x5HB7VCL73F_3:56781-716446|+	418337	421048	+	2712		NCBI_chr7_b31:5911834-6124460	6089148	6091859	AC009412.6:1-212627|+	177315	180026	+	2712		2708	2710/2712 (99%)	0/2712 (0%)
DELETION	6510947	6510959					0	DELETION	UNMATCHED	6091860	6091873					25	UNMATCHED
CRA_TCAGchr7.v1:6146692-6806357	6510947	6524562	GA_x5HB7VCL73F_3:56781-716446|+	421036	434651	+	13616		NCBI_chr7_b31:5911834-6124460	6091874	6105485	AC009412.6:1-212627|+	180041	193652	+	13612		13545	13588/13616 (99%)	4/13616 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6524388	6543378	GA_x5HB7VCL73F_3:56781-716446|+	434477	453467	+	18991		NCBI_chr7_b31:5911834-6124460	6105473	6124460	AC009412.6:1-212627|+	193640	212627	+	18988		18923	18965/18992 (99%)	5/18992 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6543379	6561379	GA_x5HB7VCL73F_3:56781-716446|+	453468	471468	+	18001		NCBI_chr7_b31:6124461-6259534	6124461	6142459	AC072052.6:1-135074|+	1	17999	+	17999		17884	17968/18007 (99%)	14/18007 (0%)
VARIATION	6561380	6561926					547	VARIATION	VARIATION	6142460	6142677					218	VARIATION
CRA_TCAGchr7.v1:6146692-6806357	6561927	6585253	GA_x5HB7VCL73F_3:56781-716446|+	472016	495342	+	23327		NCBI_chr7_b31:6124461-6259534	6142678	6166000	AC072052.6:1-135074|+	18218	41540	+	23323		23202	23279/23331 (99%)	12/23331 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6585226	6678771	GA_x5HB7VCL73F_3:56781-716446|+	495315	588860	+	93546		NCBI_chr7_b31:6124461-6259534	6165997	6259534	AC072052.6:1-135074|+	41537	135074	+	93538		93101	93404/93577 (99%)	70/93577 (0%)
CRA_TCAGchr7.v1:6146692-6806357	6678772	6683284	GA_x5HB7VCL73F_3:56781-716446|+	588861	593373	+	4513		NCBI_chr7_b31:6259535-6298763	6259535	6264051	AC079742.6:1-39229|+	1	4517	+	4517		4388	4455/4517 (98%)	4/4517 (0%)
UNMATCHED	6683285	6683587					303	UNMATCHED	DELETION	6263912	6264051					0	DELETION
CRA_TCAGchr7.v1:6146692-6806357	6683588	6693610	GA_x5HB7VCL73F_3:56781-716446|+	593677	603699	+	10023		NCBI_chr7_b31:6259535-6298763	6263912	6273925	AC079742.6:1-39229|+	4378	14391	+	10014		9963	9998/10023 (99%)	9/10023 (0%)
VARIATION	6693611	6693961					351	VARIATION	VARIATION	6273926	6274104					179	VARIATION
CRA_TCAGchr7.v1:6146692-6806357	6693962	6717203	GA_x5HB7VCL73F_3:56781-716446|+	604051	627292	+	23242		NCBI_chr7_b31:6259535-6298763	6274105	6297359	AC079742.6:1-39229|+	14571	37825	+	23255		23015	23173/23261 (99%)	25/23261 (0%)
VARIATION	6717204	6719707					2504	VARIATION	VARIATION	6297360	6299848					2489	VARIATION
CRA_TCAGchr7.v1:6146692-6806357	6719708	6768132	GA_x5HB7VCL73F_3:56781-716446|+	629797	678221	+	48425		NCBI_chr7_b31:6298764-6470730	6299849	6348295	AC073343.6:1-171967|+	1086	49532	+	48447		48234	48378/48452 (99%)	32/48452 (0%)
VARIATION	6768133	6768166					34	VARIATION	VARIATION	6348296	6348333					38	VARIATION
CRA_TCAGchr7.v1:6146692-6806357	6768167	6806357	GA_x5HB7VCL73F_3:56781-716446|+	678256	716446	+	38191		NCBI_chr7_b31:6298764-6470730	6348334	6386512	AC073343.6:1-171967|+	49571	87749	+	38179		38075	38151/38192 (99%)	14/38192 (0%)
CRA_TCAGchr7.v1:6806358-6892575	6806358	6890575	AC073343.6:87750-173967|+	87750	171967	+	84218		NCBI_chr7_b31:6298764-6470730	6386513	6470730	AC073343.6:1-171967|+	87750	171967	+	84218		84218	84218/84218 (100%)	0/84218 (0%)
CRA_TCAGchr7.v1:6890576-6892575	6890576	6892575					2000		NCBI_chr7_b31:6470731-6472730	6470731	6472730					2000
CRA_TCAGchr7.v1:6892576-6950002	6892576	6948002	AC079882.6:2001-59427|+	2001	57427	+	55427		NCBI_chr7_b31:6470731-6528157	6472731	6528157	AC079882.6:1-57427|+	2001	57427	+	55427		55427	55427/55427 (100%)	0/55427 (0%)
CRA_TCAGchr7.v1:6892576-6950002	6948003	6950002	AC079882.6:2001-59427|+	57428	59427	+	2000		NCBI_chr7_b31:6528158-6710669	6528158	6530157	AC079804.5:1-182512|+	1	2000	+	2000		2000	2000/2000 (100%)	0/2000 (0%)
CRA_TCAGchr7.v1:6950003-7102375	6950003	7102375	AC079804.5:2001-154373|+	2001	154373	+	152373		NCBI_chr7_b31:6528158-6710669	6530158	6682530	AC079804.5:1-182512|+	2001	154373	+	152373		152373	152373/152373 (100%)	0/152373 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7102376	7130514	GA_x5HB7VCL79P_4:1-22697252|-	22669114	22697252	+	28139		NCBI_chr7_b31:6528158-6710669	6682531	6710669	AC079804.5:1-182512|+	154374	182512	+	28139		28014	28088/28142 (99%)	6/28142 (0%)
UNMATCHED	7130515	7130516					2	UNMATCHED	DELETION	6710669	6710670					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	7130517	7172613	GA_x5HB7VCL79P_4:1-22697252|-	22627015	22669111	+	42097		NCBI_chr7_b31:6710670-6763171	6710670	6752773	AC092104.5:1-52502|+	1	42104	+	42104		41649	41910/42111 (99%)	21/42111 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7171853	7183156	GA_x5HB7VCL79P_4:1-22697252|-	22616472	22627775	+	11304		NCBI_chr7_b31:6710670-6763171	6751868	6763171	AC092104.5:1-52502|+	41199	52502	+	11304		11136	11238/11310 (99%)	12/11310 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7183157	7274255	GA_x5HB7VCL79P_4:1-22697252|-	22525373	22616471	+	91099		NCBI_chr7_b31:6763172-6854282	6763172	6854282	AC011230.3:1-91111|+	1	91111	+	91111		90755	90976/91127 (99%)	44/91127 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7274256	7389986	GA_x5HB7VCL79P_4:1-22697252|-	22409642	22525372	+	115731		NCBI_chr7_b31:6854283-6970036	6854283	6970036	AC005532.2:1-115754|+	1	115754	+	115754		115364	115600/115766 (99%)	47/115766 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7389987	7405205	GA_x5HB7VCL79P_4:1-22697252|-	22394423	22409641	+	15219		NCBI_chr7_b31:6970037-6985258	6970037	6985258	AC079448.5:1-15222|+	1	15222	+	15222		15134	15194/15224 (99%)	7/15224 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7405206	7472403	GA_x5HB7VCL79P_4:1-22697252|-	22327225	22394422	+	67198		NCBI_chr7_b31:6985259-7138264	6985259	7052407	AC006356.3:1-153006|+	1	67149	+	67149		66632	66976/67215 (99%)	83/67215 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7469222	7558278	GA_x5HB7VCL79P_4:1-22697252|-	22241350	22330406	+	89057		NCBI_chr7_b31:6985259-7138264	7049226	7138264	AC006356.3:1-153006|+	63968	153006	+	89039		88808	88969/89065 (99%)	34/89065 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7558279	7590713	GA_x5HB7VCL79P_4:1-22697252|-	22208915	22241349	+	32435		NCBI_chr7_b31:7138265-7170697	7138265	7170697	AC009402.3:1-32433|+	1	32433	+	32433		32413	32429/32435 (99%)	2/32435 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7590714	7720551	GA_x5HB7VCL79P_4:1-22697252|-	22079077	22208914	+	129838		NCBI_chr7_b31:7170698-7300524	7170698	7300524	AC004982.1:1-129827|+	1	129827	+	129827		129243	129606/129874 (99%)	83/129874 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7720552	7723277	GA_x5HB7VCL79P_4:1-22697252|-	22076351	22079076	+	2726		NCBI_chr7_b31:7300525-7375400	7300525	7303242	AC004948.2:1-74876|+	1	2718	+	2718		2686	2711/2726 (99%)	8/2726 (0%)
CRA_TCAGchr7.v1:7723278-7741712	7723278	7741712					18435		NCBI_chr7_b31:7303243-7321661	7303243	7321661					18419
CRA_TCAGchr7.v1:7102376-29799627	7741713	7782708	GA_x5HB7VCL79P_4:1-22697252|-	22016920	22057915	+	40996		NCBI_chr7_b31:7300525-7375400	7321662	7362690	AC004948.2:1-74876|+	21138	62166	+	41029		40780	40936/41032 (99%)	39/41032 (0%)
DELETION	7782441	7782708					0	DELETION	UNMATCHED	7362691	7363456					1032	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	7782441	7794379	GA_x5HB7VCL79P_4:1-22697252|-	22005249	22017187	+	11939		NCBI_chr7_b31:7300525-7375400	7363457	7375400	AC004948.2:1-74876|+	62933	74876	+	11944		11869	11909/11944 (99%)	5/11944 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7794380	7903496	GA_x5HB7VCL79P_4:1-22697252|-	21896132	22005248	+	109117		NCBI_chr7_b31:7375401-7484543	7375401	7484539	AC007161.1:1-109143|+	1	109139	+	109139		108770	109004/109148 (99%)	40/109148 (0%)
VARIATION	7903497	7903501					5	VARIATION	VARIATION	7484540	7484543					4	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	7903502	7942989	GA_x5HB7VCL79P_4:1-22697252|-	21856639	21896126	+	39488		NCBI_chr7_b31:7484544-7524037	7484544	7524037	AC009473.3:1-39494|+	1	39494	+	39494		39222	39390/39503 (99%)	24/39503 (0%)
CRA_TCAGchr7.v1:7102376-29799627	7942990	7943472	GA_x5HB7VCL79P_4:1-22697252|-	21856156	21856638	+	483		NCBI_chr7_b31:7524038-7625605	7524038	7524520	AC006465.2:1-101568|+	1	483	+	483		483	483/483 (100%)	0/483 (0%)
UNMATCHED	7943473	7943481					9	UNMATCHED	DELETION	7524507	7524520					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	7943482	8044598	GA_x5HB7VCL79P_4:1-22697252|-	21755030	21856146	+	101117		NCBI_chr7_b31:7524038-7625605	7524507	7625605	AC006465.2:1-101568|+	470	101568	+	101099		100740	100966/101132 (99%)	48/101132 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8044599	8115431	GA_x5HB7VCL79P_4:1-22697252|-	21684197	21755029	+	70833		NCBI_chr7_b31:7625606-7803766	7625606	7696445	AC006042.2:1-178161|+	1	70840	+	70840		70595	70759/70858 (99%)	43/70858 (0%)
CRA_TCAGchr7.v1:8115432-8214301	8115432	8214301					98870		NCBI_chr7_b31:7696446-7795318	7696446	7795318					98873
CRA_TCAGchr7.v1:7102376-29799627	8214302	8222741	GA_x5HB7VCL79P_4:1-22697252|-	21576887	21585326	+	8440		NCBI_chr7_b31:7625606-7803766	7795319	7803766	AC006042.2:1-178161|+	169714	178161	+	8448		8363	8415/8452 (99%)	16/8452 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8222742	8375040	GA_x5HB7VCL79P_4:1-22697252|-	21424588	21576886	+	152299		NCBI_chr7_b31:7803767-7956089	7803767	7956089	AC007009.2:1-152323|+	1	152323	+	152323		151674	152087/152355 (99%)	88/152355 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8375041	8435643	GA_x5HB7VCL79P_4:1-22697252|-	21363985	21424587	+	60603		NCBI_chr7_b31:7956090-8064078	7956090	8016684	AC007128.2:1-107989|+	1	60595	+	60595		60383	60525/60607 (99%)	16/60607 (0%)
UNMATCHED	8435644	8438126					2483	UNMATCHED	DELETION	8016683	8016684					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	8438127	8485508	GA_x5HB7VCL79P_4:1-22697252|-	21314120	21361501	+	47382		NCBI_chr7_b31:7956090-8064078	8016683	8064078	AC007128.2:1-107989|+	60594	107989	+	47396		47193	47312/47401 (99%)	24/47401 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8485509	8497448	GA_x5HB7VCL79P_4:1-22697252|-	21302180	21314119	+	11940		NCBI_chr7_b31:8064079-8197949	8064079	8076021	AC004861.1:1-133871|+	1	11943	+	11943		11872	11915/11943 (99%)	3/11943 (0%)
DELETION	8497435	8497448					0	DELETION	UNMATCHED	8076022	8076028					19	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	8497435	8619351	GA_x5HB7VCL79P_4:1-22697252|-	21180277	21302193	+	121917		NCBI_chr7_b31:8064079-8197949	8076029	8197949	AC004861.1:1-133871|+	11951	133871	+	121921		121670	121825/121930 (99%)	22/121930 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8619352	8747373	GA_x5HB7VCL79P_4:1-22697252|-	21052255	21180276	+	128022		NCBI_chr7_b31:8197950-8325969	8197950	8325969	AC004457.1:1-128020|+	1	128020	+	128020		127992	128012/128022 (99%)	2/128022 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8747374	8760828	GA_x5HB7VCL79P_4:1-22697252|-	21038800	21052254	+	13455		NCBI_chr7_b31:8325970-8446934	8325970	8339427	AC004613.1:1-120965|+	1	13458	+	13458		13215	13362/13464 (99%)	15/13464 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8760777	8764372	GA_x5HB7VCL79P_4:1-22697252|-	21035256	21038851	+	3596		NCBI_chr7_b31:8325970-8446934	8339398	8343002	AC004613.1:1-120965|+	13429	17033	+	3605		3485	3554/3608 (98%)	15/3608 (0%)
DELETION	8764363	8764372					0	DELETION	UNMATCHED	8343003	8343210					216	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	8764363	8868077	GA_x5HB7VCL79P_4:1-22697252|-	20931551	21035265	+	103715		NCBI_chr7_b31:8325970-8446934	8343211	8446934	AC004613.1:1-120965|+	17242	120965	+	103724		103312	103567/103737 (99%)	35/103737 (0%)
CRA_TCAGchr7.v1:7102376-29799627	8868078	8995128	GA_x5HB7VCL79P_4:1-22697252|-	20804500	20931550	+	127051		NCBI_chr7_b31:8446935-8574004	8446935	8574003	AC004740.1:1-127070|+	1	127069	+	127069		126884	126995/127071 (99%)	22/127071 (0%)
VARIATION	8995129	8995154					26	VARIATION	VARIATION	8574004	8574004					1	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	8995155	9049513	GA_x5HB7VCL79P_4:1-22697252|-	20750115	20804473	+	54359		NCBI_chr7_b31:8574005-8628358	8574005	8628358	AC009500.2:1-54354|+	1	54354	+	54354		54154	54275/54366 (99%)	19/54366 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9049514	9066555	GA_x5HB7VCL79P_4:1-22697252|-	20733073	20750114	+	17042		NCBI_chr7_b31:8628359-8718020	8628359	8645400	AC007164.3:1-89662|+	1	17042	+	17042		16883	16980/17047 (99%)	10/17047 (0%)
DELETION	9066553	9066555					0	DELETION	UNMATCHED	8645401	8645417					18	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	9066553	9139168	GA_x5HB7VCL79P_4:1-22697252|-	20660460	20733075	+	72616		NCBI_chr7_b31:8628359-8718020	8645418	8718020	AC007164.3:1-89662|+	17060	89662	+	72603		72234	72466/72628 (99%)	37/72628 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9139169	9156483	GA_x5HB7VCL79P_4:1-22697252|-	20643145	20660459	+	17315		NCBI_chr7_b31:8718021-8876361	8718021	8735328	AC004852.2:1-158341|+	1	17308	+	17308		17223	17287/17321 (99%)	19/17321 (0%)
VARIATION	9156484	9163418					6935	VARIATION	VARIATION	8735329	8735329					1	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	9163419	9260681	GA_x5HB7VCL79P_4:1-22697252|-	20538947	20636209	+	97263		NCBI_chr7_b31:8718021-8876361	8735330	8832558	AC004852.2:1-158341|+	17310	114538	+	97229		96854	97098/97277 (99%)	62/97277 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9256067	9304489	GA_x5HB7VCL79P_4:1-22697252|-	20495139	20543561	+	48423		NCBI_chr7_b31:8718021-8876361	8827944	8876361	AC004852.2:1-158341|+	109924	158341	+	48418		48324	48386/48423 (99%)	5/48423 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9304490	9315349	GA_x5HB7VCL79P_4:1-22697252|-	20484279	20495138	+	10860		NCBI_chr7_b31:8876362-9008052	8876362	8887221	AC074347.8:1-131691|+	1	10860	+	10860		10860	10860/10860 (100%)	0/10860 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9315307	9426515	GA_x5HB7VCL79P_4:1-22697252|-	20373113	20484321	+	111209		NCBI_chr7_b31:8876362-9008052	8887208	8998453	AC074347.8:1-131691|+	10847	122092	+	111246		110502	110977/111277 (99%)	99/111277 (0%)
VARIATION	9426516	9426743					228	VARIATION	VARIATION	8998454	8998691					238	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	9426744	9436122	GA_x5HB7VCL79P_4:1-22697252|-	20363506	20372884	+	9379		NCBI_chr7_b31:8876362-9008052	8998692	9008052	AC074347.8:1-131691|+	122331	131691	+	9361		9289	9342/9380 (99%)	20/9380 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9436123	9440600	GA_x5HB7VCL79P_4:1-22697252|-	20359028	20363505	+	4478		NCBI_chr7_b31:9008053-9012529	9008053	9012529	AC092464.2:1-4477|+	1	4477	+	4477		4451	4467/4478 (99%)	1/4478 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9440601	9444189	GA_x5HB7VCL79P_4:1-22697252|-	20355439	20359027	+	3589		NCBI_chr7_b31:9012530-9127219	9012530	9016120	AC079996.5:1-114690|+	1	3591	+	3591		3569	3585/3591 (99%)	2/3591 (0%)
VARIATION	9444190	9444552					363	VARIATION	VARIATION	9016121	9016272					152	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	9444553	9457412	GA_x5HB7VCL79P_4:1-22697252|-	20342216	20355075	+	12860		NCBI_chr7_b31:9012530-9127219	9016273	9029129	AC079996.5:1-114690|+	3744	16600	+	12857		12547	12720/12868 (98%)	19/12868 (0%)
UNMATCHED	9457413	9457632					220	UNMATCHED	DELETION	9028743	9029129					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	9457633	9512270	GA_x5HB7VCL79P_4:1-22697252|-	20287358	20341995	+	54638		NCBI_chr7_b31:9012530-9127219	9028743	9083383	AC079996.5:1-114690|+	16214	70854	+	54641		54419	54546/54643 (99%)	7/54643 (0%)
VARIATION	9512271	9518342					6072	VARIATION	VARIATION	9083384	9089540					6157	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	9518343	9556021	GA_x5HB7VCL79P_4:1-22697252|-	20243607	20281285	+	37679		NCBI_chr7_b31:9012530-9127219	9089541	9127219	AC079996.5:1-114690|+	77012	114690	+	37679		37610	37650/37680 (99%)	2/37680 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9556022	9617115	GA_x5HB7VCL79P_4:1-22697252|-	20182513	20243606	+	61094		NCBI_chr7_b31:9127220-9293566	9127220	9188322	AC079756.4:1-166347|+	1	61103	+	61103		60860	61004/61108 (99%)	19/61108 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9617061	9703290	GA_x5HB7VCL79P_4:1-22697252|-	20096338	20182567	+	86230		NCBI_chr7_b31:9127220-9293566	9188278	9274499	AC079756.4:1-166347|+	61059	147280	+	86222		85845	86092/86249 (99%)	46/86249 (0%)
DELETION	9703274	9703290					0	DELETION	UNMATCHED	9274500	9274503					19	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	9703274	9707798	GA_x5HB7VCL79P_4:1-22697252|-	20091830	20096354	+	4525		NCBI_chr7_b31:9127220-9293566	9274504	9279030	AC079756.4:1-166347|+	147285	151811	+	4527		4434	4487/4530 (99%)	8/4530 (0%)
DELETION	9707775	9707798					0	DELETION	UNMATCHED	9279031	9280349					1341	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	9707775	9720992	GA_x5HB7VCL79P_4:1-22697252|-	20078636	20091853	+	13218		NCBI_chr7_b31:9127220-9293566	9280350	9293566	AC079756.4:1-166347|+	153131	166347	+	13217		13138	13189/13225 (99%)	15/13225 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9720993	9785240	GA_x5HB7VCL79P_4:1-22697252|-	20014388	20078635	+	64248		NCBI_chr7_b31:9293567-9357795	9293567	9357795	AC096553.1:1-64229|+	1	64229	+	64229		63945	64133/64256 (99%)	35/64256 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9785241	9796096	GA_x5HB7VCL79P_4:1-22697252|-	20003532	20014387	+	10856		NCBI_chr7_b31:9357796-9368651	9357796	9368651	AC096580.1:1-10856|+	1	10856	+	10856		10822	10839/10856 (99%)	0/10856 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9796097	9798892	GA_x5HB7VCL79P_4:1-22697252|-	20000736	20003531	+	2796		NCBI_chr7_b31:9368652-9482137	9368652	9371447	AC060834.8:1-113486|+	1	2796	+	2796		2786	2791/2796 (99%)	0/2796 (0%)
DELETION	9798884	9798892					0	DELETION	UNMATCHED	9371448	9371463					23	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	9798884	9880505	GA_x5HB7VCL79P_4:1-22697252|-	19919123	20000744	+	81622		NCBI_chr7_b31:9368652-9482137	9371464	9453079	AC060834.8:1-113486|+	2813	84428	+	81616		81197	81452/81652 (99%)	66/81652 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9876361	9909559	GA_x5HB7VCL79P_4:1-22697252|-	19890069	19923267	+	33199		NCBI_chr7_b31:9368652-9482137	9448935	9482137	AC060834.8:1-113486|+	80284	113486	+	33203		33132	33179/33206 (99%)	10/33206 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9909560	9977345	GA_x5HB7VCL79P_4:1-22697252|-	19822283	19890068	+	67786		NCBI_chr7_b31:9482138-9549928	9482138	9549928	AC006363.3:1-67791|+	1	67791	+	67791		67511	67692/67808 (99%)	39/67808 (0%)
CRA_TCAGchr7.v1:7102376-29799627	9977346	10030151	GA_x5HB7VCL79P_4:1-22697252|-	19769477	19822282	+	52806		NCBI_chr7_b31:9549929-9602737	9549929	9602737	AC010991.4:1-52809|+	1	52809	+	52809		52639	52737/52810 (99%)	5/52810 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10030152	10113327	GA_x5HB7VCL79P_4:1-22697252|-	19686301	19769476	+	83176		NCBI_chr7_b31:9602738-9742486	9602738	9685932	AC004936.2:201-139949|-	56755	139949	+	83195		82611	82985/83224 (99%)	77/83224 (0%)
VARIATION	10113328	10113328					1	VARIATION	VARIATION	9685933	9685955					23	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	10113329	10169849	GA_x5HB7VCL79P_4:1-22697252|-	19629779	19686299	+	56521		NCBI_chr7_b31:9602738-9742486	9685956	9742486	AC004936.2:201-139949|-	201	56731	+	56531		56211	56397/56538 (99%)	24/56538 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10169850	10256979	GA_x5HB7VCL79P_4:1-22697252|-	19542649	19629778	+	87130		NCBI_chr7_b31:9742487-9829609	9742487	9829609	AC006373.3:201-87323|-	201	87323	+	87123		86960	87065/87135 (99%)	17/87135 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10256980	10274500	GA_x5HB7VCL79P_4:1-22697252|-	19525128	19542648	+	17521		NCBI_chr7_b31:9829610-9964313	9829610	9847119	AC004879.2:201-134904|-	117395	134904	+	17510		17352	17452/17522 (99%)	13/17522 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10274378	10391684	GA_x5HB7VCL79P_4:1-22697252|-	19407944	19525250	+	117307		NCBI_chr7_b31:9829610-9964313	9847004	9964313	AC004879.2:201-134904|-	201	117510	+	117310		116955	117176/117327 (99%)	37/117327 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10391685	10477581	GA_x5HB7VCL79P_4:1-22697252|-	19322047	19407943	+	85897		NCBI_chr7_b31:9964314-10050219	9964314	10050219	AC011282.3:201-86106|-	201	86106	+	85906		85745	85850/85910 (99%)	17/85910 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10477582	10534786	GA_x5HB7VCL79P_4:1-22697252|-	19264842	19322046	+	57205		NCBI_chr7_b31:10050220-10107426	10050220	10107426	AC073098.10:201-57407|-	201	57407	+	57207		57169	57194/57209 (99%)	6/57209 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10534787	10610103	GA_x5HB7VCL79P_4:1-22697252|-	19189525	19264841	+	75317		NCBI_chr7_b31:10107427-10182743	10107427	10182743	AC009945.2:201-75517|-	201	75517	+	75317		75256	75292/75318 (99%)	2/75318 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10610104	10701395	GA_x5HB7VCL79P_4:1-22697252|-	19098233	19189524	+	91292		NCBI_chr7_b31:10182744-10354909	10182744	10274029	AC004949.1:201-172366|-	81081	172366	+	91286		90852	91134/91306 (99%)	34/91306 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10700649	10782046	GA_x5HB7VCL79P_4:1-22697252|-	19017582	19098979	+	81398		NCBI_chr7_b31:10182744-10354909	10273498	10354909	AC004949.1:201-172366|-	201	81612	+	81412		81235	81354/81423 (99%)	36/81423 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10782047	10818585	GA_x5HB7VCL79P_4:1-22697252|-	18981043	19017581	+	36539		NCBI_chr7_b31:10354910-10391448	10354910	10391448	AC004415.1:201-36739|-	201	36739	+	36539		36504	36527/36540 (99%)	2/36540 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10818586	10927854	GA_x5HB7VCL79P_4:1-22697252|-	18871774	18981042	+	109269		NCBI_chr7_b31:10391449-10500717	10391449	10500717	AC004535.1:201-109469|-	201	109469	+	109269		108977	109153/109279 (99%)	20/109279 (0%)
CRA_TCAGchr7.v1:7102376-29799627	10927855	11009953	GA_x5HB7VCL79P_4:1-22697252|-	18789675	18871773	+	82099		NCBI_chr7_b31:10500718-10582808	10500718	10582808	AC005376.1:201-82291|-	201	82291	+	82091		81982	82054/82101 (99%)	12/82101 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11009954	11103305	GA_x5HB7VCL79P_4:1-22697252|-	18696323	18789674	+	93352		NCBI_chr7_b31:10582809-10676153	10582809	10676153	AC007029.3:2001-95345|-	2001	95345	+	93345		93108	93256/93354 (99%)	11/93354 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11103306	11110159	GA_x5HB7VCL79P_4:1-22697252|-	18689469	18696322	+	6854		NCBI_chr7_b31:10676154-10683007	10676154	10683007	AC104089.4:1-6854|+	1	6854	+	6854		6854	6854/6854 (100%)	0/6854 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11110160	11228803	GA_x5HB7VCL79P_4:1-22697252|-	18570825	18689468	+	118644		NCBI_chr7_b31:10683008-10817869	10683008	10801643	AC005007.1:2001-136862|-	18227	136862	+	118636		118497	118594/118646 (99%)	12/118646 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11228760	11245055	GA_x5HB7VCL79P_4:1-22697252|-	18554573	18570868	+	16296		NCBI_chr7_b31:10683008-10817869	10801574	10817869	AC005007.1:2001-136862|-	2001	18296	+	16296		16273	16290/16297 (99%)	2/16297 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11245056	11305458	GA_x5HB7VCL79P_4:1-22697252|-	18494170	18554572	+	60403		NCBI_chr7_b31:10817870-10898018	10817870	10878292	AC080064.6:1-80149|+	1	60423	+	60423		60224	60357/60430 (99%)	34/60430 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11301228	11310604	GA_x5HB7VCL79P_4:1-22697252|-	18489024	18498400	+	9377		NCBI_chr7_b31:10817870-10898018	10874062	10883440	AC080064.6:1-80149|+	56193	65571	+	9379		9350	9367/9379 (99%)	2/9379 (0%)
DELETION	11310604	11310605					0	DELETION	UNMATCHED	10883441	10883552					112	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	11310605	11325067	GA_x5HB7VCL79P_4:1-22697252|-	18474561	18489023	+	14463		NCBI_chr7_b31:10817870-10898018	10883553	10898018	AC080064.6:1-80149|+	65684	80149	+	14466		14398	14444/14470 (99%)	11/14470 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11325068	11375369	GA_x5HB7VCL79P_4:1-22697252|-	18424259	18474560	+	50302		NCBI_chr7_b31:10898019-10980897	10898019	10948321	AC004538.1:1-82879|+	1	50303	+	50303		50268	50288/50303 (99%)	1/50303 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11375321	11407902	GA_x5HB7VCL79P_4:1-22697252|-	18391726	18424307	+	32582		NCBI_chr7_b31:10898019-10980897	10948297	10980897	AC004538.1:1-82879|+	50279	82879	+	32601		32500	32558/32601 (99%)	19/32601 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11407903	11551467	GA_x5HB7VCL79P_4:1-22697252|-	18248161	18391725	+	143565		NCBI_chr7_b31:10980898-11124448	10980898	11124448	AC004160.1:1-143551|+	1	143551	+	143551		143367	143498/143569 (99%)	22/143569 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11551468	11647194	GA_x5HB7VCL79P_4:1-22697252|-	18152434	18248160	+	95727		NCBI_chr7_b31:11124449-11220169	11124449	11220169	AC004141.1:1-95721|+	1	95721	+	95721		95275	95550/95745 (99%)	42/95745 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11647195	11759413	GA_x5HB7VCL79P_4:1-22697252|-	18040215	18152433	+	112219		NCBI_chr7_b31:11220170-11332425	11220170	11332425	AC004614.2:1-112256|+	1	112256	+	112256		111759	112048/112262 (99%)	49/112262 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11759414	11779486	GA_x5HB7VCL79P_4:1-22697252|-	18020142	18040214	+	20073		NCBI_chr7_b31:11332426-11460214	11332426	11352497	AC010908.3:1-127789|+	1	20072	+	20072		19978	20042/20081 (99%)	17/20081 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11779407	11887114	GA_x5HB7VCL79P_4:1-22697252|-	17912514	18020221	+	107708		NCBI_chr7_b31:11332426-11460214	11352464	11460214	AC010908.3:1-127789|+	20039	127789	+	107751		107288	107557/107756 (99%)	53/107756 (0%)
CRA_TCAGchr7.v1:7102376-29799627	11887115	12043419	GA_x5HB7VCL79P_4:1-22697252|-	17756209	17912513	+	156305		NCBI_chr7_b31:11460215-11616554	11460215	11616554	AC073109.2:1-156340|+	1	156340	+	156340		155891	156154/156347 (99%)	49/156347 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12043420	12085207	GA_x5HB7VCL79P_4:1-22697252|-	17714421	17756208	+	41788		NCBI_chr7_b31:11616555-11753791	11616555	11658341	AC092213.4:1-137237|+	1	41787	+	41787		41722	41763/41789 (99%)	3/41789 (0%)
UNMATCHED	12085208	12085557					350	UNMATCHED	DELETION	11658340	11658341					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	12085558	12088534	GA_x5HB7VCL79P_4:1-22697252|-	17711094	17714070	+	2977		NCBI_chr7_b31:11616555-11753791	11658340	11661302	AC092213.4:1-137237|+	41786	44748	+	2963		2926	2954/2977 (99%)	14/2977 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12088492	12096100	GA_x5HB7VCL79P_4:1-22697252|-	17703528	17711136	+	7609		NCBI_chr7_b31:11616555-11753791	11661286	11668894	AC092213.4:1-137237|+	44732	52340	+	7609		7579	7594/7609 (99%)	0/7609 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12096088	12130315	GA_x5HB7VCL79P_4:1-22697252|-	17669313	17703540	+	34228		NCBI_chr7_b31:11616555-11753791	11668859	11703087	AC092213.4:1-137237|+	52305	86533	+	34229		34138	34202/34236 (99%)	15/34236 (0%)
DELETION	12130303	12130315					0	DELETION	UNMATCHED	11703088	11703398					322	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	12130303	12130769	GA_x5HB7VCL79P_4:1-22697252|-	17668859	17669325	+	467		NCBI_chr7_b31:11616555-11753791	11703399	11703865	AC092213.4:1-137237|+	86845	87311	+	467		457	462/467 (98%)	0/467 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12130735	12180669	GA_x5HB7VCL79P_4:1-22697252|-	17618959	17668893	+	49935		NCBI_chr7_b31:11616555-11753791	11703853	11753791	AC092213.4:1-137237|+	87299	137237	+	49939		49695	49860/49960 (99%)	46/49960 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12180670	12253411	GA_x5HB7VCL79P_4:1-22697252|-	17546217	17618958	+	72742		NCBI_chr7_b31:11753792-11826533	11753792	11826533	AC007270.2:201-72942|-	201	72942	+	72742		72480	72632/72749 (99%)	14/72749 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12253412	12270976	GA_x5HB7VCL79P_4:1-22697252|-	17528652	17546216	+	17565		NCBI_chr7_b31:11826534-11877898	11826534	11844104	AC007745.3:201-51565|-	33995	51565	+	17571		17477	17532/17572 (99%)	8/17572 (0%)
UNMATCHED	12270977	12271533					557	UNMATCHED	DELETION	11843638	11844104					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	12271534	12305796	GA_x5HB7VCL79P_4:1-22697252|-	17493832	17528094	+	34263		NCBI_chr7_b31:11826534-11877898	11843638	11877898	AC007745.3:201-51565|-	201	34461	+	34261		34050	34183/34271 (99%)	18/34271 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12305797	12354001	GA_x5HB7VCL79P_4:1-22697252|-	17445627	17493831	+	48205		NCBI_chr7_b31:11877899-12036468	11877899	11926083	AC007321.2:201-158770|-	110586	158770	+	48185		47919	48103/48212 (99%)	34/48212 (0%)
DELETION	12353989	12354001					0	DELETION	UNMATCHED	11926084	11926392					320	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	12353989	12464071	GA_x5HB7VCL79P_4:1-22697252|-	17335557	17445639	+	110083		NCBI_chr7_b31:11877899-12036468	11926393	12036468	AC007321.2:201-158770|-	201	110276	+	110076		109773	109962/110086 (99%)	13/110086 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12464072	12597060	GA_x5HB7VCL79P_4:1-22697252|-	17202568	17335556	+	132989		NCBI_chr7_b31:12036469-12205191	12036469	12169469	AC013470.10:2001-170723|-	37723	170723	+	133001		132374	132771/133028 (99%)	66/133028 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12596626	12632353	GA_x5HB7VCL79P_4:1-22697252|-	17167275	17203002	+	35728		NCBI_chr7_b31:12036469-12205191	12169470	12205191	AC013470.10:2001-170723|-	2001	37722	+	35722		35624	35691/35728 (99%)	6/35728 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12632354	12638306	GA_x5HB7VCL79P_4:1-22697252|-	17161322	17167274	+	5953		NCBI_chr7_b31:12205192-12219855	12205192	12211143	AC092064.4:1-14664|+	1	5952	+	5952		5916	5940/5954 (99%)	3/5954 (0%)
DELETION	12637824	12638306					0	DELETION	UNMATCHED	12211144	12212081					1419	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	12637824	12645627	GA_x5HB7VCL79P_4:1-22697252|-	17154001	17161804	+	7804		NCBI_chr7_b31:12205192-12219855	12212082	12219855	AC092064.4:1-14664|+	6891	14664	+	7774		7633	7731/7804 (99%)	30/7804 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12645628	12741907	GA_x5HB7VCL79P_4:1-22697252|-	17057721	17154000	+	96280		NCBI_chr7_b31:12219856-12327093	12219856	12316126	AC005281.2:1-107238|+	1	96271	+	96271		96075	96206/96287 (99%)	23/96287 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12741845	12752856	GA_x5HB7VCL79P_4:1-22697252|-	17046772	17057783	+	11012		NCBI_chr7_b31:12219856-12327093	12316084	12327093	AC005281.2:1-107238|+	96229	107238	+	11010		10971	10994/11012 (99%)	2/11012 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12752857	12755903	GA_x5HB7VCL79P_4:1-22697252|-	17043725	17046771	+	3047		NCBI_chr7_b31:12327094-12330139	12327094	12330139	AC073232.7:1-3046|+	1	3046	+	3046		3028	3040/3047 (99%)	1/3047 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12755904	12829188	GA_x5HB7VCL79P_4:1-22697252|-	16970440	17043724	+	73285		NCBI_chr7_b31:12330140-12403420	12330140	12403420	AC011891.3:1-73281|+	1	73281	+	73281		73218	73265/73287 (99%)	8/73287 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12829189	12930985	GA_x5HB7VCL79P_4:1-22697252|-	16868643	16970439	+	101797		NCBI_chr7_b31:12403421-12505228	12403421	12505228	AC005228.1:1-101808|+	1	101808	+	101808		101438	101672/101821 (99%)	37/101821 (0%)
CRA_TCAGchr7.v1:7102376-29799627	12930986	13034028	GA_x5HB7VCL79P_4:1-22697252|-	16765600	16868642	+	103043		NCBI_chr7_b31:12505229-12629198	12505229	12608265	AC006000.3:1-123970|+	1	103037	+	103037		102886	102986/103046 (99%)	12/103046 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13034026	13055000	GA_x5HB7VCL79P_4:1-22697252|-	16744628	16765602	+	20975		NCBI_chr7_b31:12505229-12629198	12608228	12629198	AC006000.3:1-123970|+	103000	123970	+	20971		20918	20954/20975 (99%)	4/20975 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13055001	13181196	GA_x5HB7VCL79P_4:1-22697252|-	16618432	16744627	+	126196		NCBI_chr7_b31:12629199-12755389	12629199	12755389	AC007243.4:1-126191|+	1	126191	+	126191		126123	126175/126202 (99%)	17/126202 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13181197	13310964	GA_x5HB7VCL79P_4:1-22697252|-	16488664	16618431	+	129768		NCBI_chr7_b31:12755390-12885178	12755390	12885178	AC005681.2:1-129789|+	1	129789	+	129789		129299	129619/129814 (99%)	71/129814 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13310965	13459571	GA_x5HB7VCL79P_4:1-22697252|-	16340057	16488663	+	148607		NCBI_chr7_b31:12885179-13033797	12885179	13033797	AC006996.3:1-148619|+	1	148619	+	148619		148054	148404/148644 (99%)	62/148644 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13459572	13590520	GA_x5HB7VCL79P_4:1-22697252|-	16209108	16340056	+	130949		NCBI_chr7_b31:13033798-13164740	13033798	13164740	AC011287.4:1-130943|+	1	130943	+	130943		130180	130660/130985 (99%)	78/130985 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13590521	13612380	GA_x5HB7VCL79P_4:1-22697252|-	16187248	16209107	+	21860		NCBI_chr7_b31:13164741-13186600	13164741	13186600	AC084312.4:1-21860|+	1	21860	+	21860		21808	21834/21860 (99%)	0/21860 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13612381	13677653	GA_x5HB7VCL79P_4:1-22697252|-	16121975	16187247	+	65273		NCBI_chr7_b31:13186601-13251897	13186601	13251897	AC073327.4:1-65297|+	1	65297	+	65297		64845	65126/65312 (99%)	54/65312 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13677654	13685624	GA_x5HB7VCL79P_4:1-22697252|-	16114004	16121974	+	7971		NCBI_chr7_b31:13251898-13376747	13251898	13259869	AC011288.4:1-124850|+	1	7972	+	7972		7933	7955/7972 (99%)	1/7972 (0%)
DELETION	13685568	13685624					0	DELETION	UNMATCHED	13259870	13259884					70	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	13685568	13740693	GA_x5HB7VCL79P_4:1-22697252|-	16058935	16114060	+	55126		NCBI_chr7_b31:13251898-13376747	13259885	13315006	AC011288.4:1-124850|+	7988	63109	+	55122		55048	55092/55126 (99%)	4/55126 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13740689	13747064	GA_x5HB7VCL79P_4:1-22697252|-	16052564	16058939	+	6376		NCBI_chr7_b31:13251898-13376747	13315001	13321376	AC011288.4:1-124850|+	63104	69479	+	6376		6364	6370/6376 (99%)	0/6376 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13746983	13802353	GA_x5HB7VCL79P_4:1-22697252|-	15997275	16052645	+	55371		NCBI_chr7_b31:13251898-13376747	13321375	13376747	AC011288.4:1-124850|+	69478	124850	+	55373		55232	55326/55380 (99%)	16/55380 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13802354	13812931	GA_x5HB7VCL79P_4:1-22697252|-	15986697	15997274	+	10578		NCBI_chr7_b31:13376748-13564909	13376748	13387321	AC005019.1:201-188362|-	177789	188362	+	10574		10525	10560/10580 (99%)	8/10580 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13812891	13990450	GA_x5HB7VCL79P_4:1-22697252|-	15809178	15986737	+	177560		NCBI_chr7_b31:13376748-13564909	13387322	13564909	AC005019.1:201-188362|-	201	177788	+	177588		176833	177292/177621 (99%)	94/177621 (0%)
CRA_TCAGchr7.v1:7102376-29799627	13990451	14079845	GA_x5HB7VCL79P_4:1-22697252|-	15719783	15809177	+	89395		NCBI_chr7_b31:13564910-13674068	13564910	13654303	AC004857.1:201-109359|-	19966	109359	+	89394		89320	89369/89398 (99%)	7/89398 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14079803	14099592	GA_x5HB7VCL79P_4:1-22697252|-	15700036	15719825	+	19790		NCBI_chr7_b31:13564910-13674068	13654281	13674068	AC004857.1:201-109359|-	201	19988	+	19788		19550	19695/19795 (99%)	12/19795 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14099593	14231443	GA_x5HB7VCL79P_4:1-22697252|-	15568185	15700035	+	131851		NCBI_chr7_b31:13674069-13805918	13674069	13805918	AC004909.2:201-132050|-	201	132050	+	131850		131800	131834/131853 (99%)	5/131853 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14231444	14321710	GA_x5HB7VCL79P_4:1-22697252|-	15477918	15568184	+	90267		NCBI_chr7_b31:13805919-13957034	13805919	13896233	AC005039.1:201-151316|-	61002	151316	+	90315		89851	90140/90339 (99%)	96/90339 (0%)
DELETION	14321692	14321710					0	DELETION	UNMATCHED	13896234	13896427					211	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	14321692	14382296	GA_x5HB7VCL79P_4:1-22697252|-	15417332	15477936	+	60605		NCBI_chr7_b31:13805919-13957034	13896428	13957034	AC005039.1:201-151316|-	201	60807	+	60607		60410	60542/60624 (99%)	36/60624 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14382297	14413346	GA_x5HB7VCL79P_4:1-22697252|-	15386282	15417331	+	31050		NCBI_chr7_b31:13957035-14025298	13957035	13988099	AC005248.1:201-68464|-	37400	68464	+	31065		30872	30993/31069 (99%)	23/31069 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14413313	14450572	GA_x5HB7VCL79P_4:1-22697252|-	15349056	15386315	+	37260		NCBI_chr7_b31:13957035-14025298	13988044	14025298	AC005248.1:201-68464|-	201	37455	+	37255		37152	37222/37262 (99%)	9/37262 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14450573	14489185	GA_x5HB7VCL79P_4:1-22697252|-	15310443	15349055	+	38613		NCBI_chr7_b31:14025299-14128338	14025299	14063893	AC011229.2:2001-105040|-	66446	105040	+	38595		38466	38552/38613 (99%)	18/38613 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14489102	14518651	GA_x5HB7VCL79P_4:1-22697252|-	15280977	15310526	+	29550		NCBI_chr7_b31:14025299-14128338	14063886	14093422	AC011229.2:2001-105040|-	36917	66453	+	29537		29329	29468/29557 (99%)	27/29557 (0%)
DELETION	14518638	14518651					0	DELETION	UNMATCHED	14093423	14093729					319	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	14518638	14553252	GA_x5HB7VCL79P_4:1-22697252|-	15246376	15280990	+	34615		NCBI_chr7_b31:14025299-14128338	14093730	14128338	AC011229.2:2001-105040|-	2001	36609	+	34609		34472	34562/34622 (99%)	20/34622 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14553253	14580344	GA_x5HB7VCL79P_4:1-22697252|-	15219284	15246375	+	27092		NCBI_chr7_b31:14128339-14272436	14128339	14155418	AC105459.1:1-144098|+	1	27080	+	27080		26843	26979/27095 (99%)	18/27095 (0%)
UNMATCHED	14580345	14581583					1239	UNMATCHED	DELETION	14155261	14155418					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	14581584	14677846	GA_x5HB7VCL79P_4:1-22697252|-	15121782	15218044	+	96263		NCBI_chr7_b31:14128339-14272436	14155261	14251548	AC105459.1:1-144098|+	26923	123210	+	96288		95616	96037/96308 (99%)	65/96308 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14677490	14698664	GA_x5HB7VCL79P_4:1-22697252|-	15100964	15122138	+	21175		NCBI_chr7_b31:14128339-14272436	14251259	14272436	AC105459.1:1-144098|+	122921	144098	+	21178		21081	21143/21180 (99%)	7/21180 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14698665	14751510	GA_x5HB7VCL79P_4:1-22697252|-	15048118	15100963	+	52846		NCBI_chr7_b31:14272437-14428363	14272437	14325284	AC073258.9:1-155927|+	1	52848	+	52848		52691	52787/52853 (99%)	12/52853 (0%)
DELETION	14751451	14751510					0	DELETION	UNMATCHED	14325285	14325305					79	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	14751451	14854507	GA_x5HB7VCL79P_4:1-22697252|-	14945121	15048177	+	103057		NCBI_chr7_b31:14272437-14428363	14325306	14428363	AC073258.9:1-155927|+	52870	155927	+	103058		102552	102864/103081 (99%)	47/103081 (0%)
CRA_TCAGchr7.v1:7102376-29799627	14854508	14967397	GA_x5HB7VCL79P_4:1-22697252|-	14832231	14945120	+	112890		NCBI_chr7_b31:14428364-14541248	14428364	14541248	AC006150.2:1-112885|+	1	112885	+	112885		112784	112853/112892 (99%)	9/112892 (0%)
UNMATCHED	14967398	14967409					12	UNMATCHED	DELETION	14541248	14541249					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	14967410	14980970	GA_x5HB7VCL79P_4:1-22697252|-	14818658	14832218	+	13561		NCBI_chr7_b31:14541249-14734174	14541249	14554806	AC006045.2:1-192926|+	1	13558	+	13558		13522	13549/13561 (99%)	3/13561 (0%)
DELETION	14980956	14980970					0	DELETION	UNMATCHED	14554807	14555109					316	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	14980956	15160048	GA_x5HB7VCL79P_4:1-22697252|-	14639580	14818672	+	179093		NCBI_chr7_b31:14541249-14734174	14555110	14734174	AC006045.2:1-192926|+	13862	192926	+	179065		178403	178835/179132 (99%)	106/179132 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15160049	15205120	GA_x5HB7VCL79P_4:1-22697252|-	14594508	14639579	+	45072		NCBI_chr7_b31:14734175-14853510	14734175	14779224	AC006458.2:1-119336|+	1	45050	+	45050		44936	45022/45073 (99%)	24/45073 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15205069	15279455	GA_x5HB7VCL79P_4:1-22697252|-	14520173	14594559	+	74387		NCBI_chr7_b31:14734175-14853510	14779123	14853510	AC006458.2:1-119336|+	44949	119336	+	74388		74169	74299/74394 (99%)	13/74394 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15279456	15409588	GA_x5HB7VCL79P_4:1-22697252|-	14390040	14520172	+	130133		NCBI_chr7_b31:14853511-14983636	14853511	14983636	AC091789.5:1-130126|+	1	130126	+	130126		129756	130003/130160 (99%)	61/130160 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15409589	15528567	GA_x5HB7VCL79P_4:1-22697252|-	14271061	14390039	+	118979		NCBI_chr7_b31:14983637-15102621	14983637	15102621	AC099651.4:1-118985|+	1	118985	+	118985		118589	118858/119007 (99%)	50/119007 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15528568	15546302	GA_x5HB7VCL79P_4:1-22697252|-	14253326	14271060	+	17735		NCBI_chr7_b31:15102622-15146322	15102622	15120323	AC099412.4:1-43701|+	1	17702	+	17702		17592	17671/17735 (99%)	33/17735 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15542282	15572301	GA_x5HB7VCL79P_4:1-22697252|-	14227327	14257346	+	30020		NCBI_chr7_b31:15102622-15146322	15116303	15146322	AC099412.4:1-43701|+	13682	43701	+	30020		29793	29931/30029 (99%)	18/30029 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15572302	15639758	GA_x5HB7VCL79P_4:1-22697252|-	14159870	14227326	+	67457		NCBI_chr7_b31:15146323-15227792	15146323	15213752	AC012061.4:1-81470|+	1	67430	+	67430		67030	67288/67461 (99%)	35/67461 (0%)
VARIATION	15639759	15641544					1786	VARIATION	VARIATION	15213753	15213793					41	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	15641545	15655535	GA_x5HB7VCL79P_4:1-22697252|-	14144093	14158083	+	13991		NCBI_chr7_b31:15146323-15227792	15213794	15227792	AC012061.4:1-81470|+	67472	81470	+	13999		13870	13945/14000 (99%)	10/14000 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15655536	15737559	GA_x5HB7VCL79P_4:1-22697252|-	14062069	14144092	+	82024		NCBI_chr7_b31:15227793-15309822	15227793	15309822	AC004452.1:1-82030|+	1	82030	+	82030		81696	81914/82047 (99%)	40/82047 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15737560	15743666	GA_x5HB7VCL79P_4:1-22697252|-	14055962	14062068	+	6107		NCBI_chr7_b31:15309823-15442859	15309823	15315929	AC005550.1:1-133037|+	1	6107	+	6107		6101	6104/6107 (99%)	0/6107 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15743663	15870622	GA_x5HB7VCL79P_4:1-22697252|-	13929006	14055965	+	126960		NCBI_chr7_b31:15309823-15442859	15315904	15442859	AC005550.1:1-133037|+	6082	133037	+	126956		126815	126903/126966 (99%)	16/126966 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15870623	15957181	GA_x5HB7VCL79P_4:1-22697252|-	13842447	13929005	+	86559		NCBI_chr7_b31:15442860-15529417	15442860	15529417	AC006041.2:1-86558|+	1	86558	+	86558		86433	86512/86566 (99%)	15/86566 (0%)
CRA_TCAGchr7.v1:7102376-29799627	15957182	16065411	GA_x5HB7VCL79P_4:1-22697252|-	13734217	13842446	+	108230		NCBI_chr7_b31:15529418-15694744	15529418	15637647	AC005536.2:1-165327|+	1	108230	+	108230		107618	108028/108268 (99%)	76/108268 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16065348	16078386	GA_x5HB7VCL79P_4:1-22697252|-	13721242	13734280	+	13039		NCBI_chr7_b31:15529418-15694744	15637606	15650677	AC005536.2:1-165327|+	108189	121260	+	13072		12932	13007/13072 (99%)	33/13072 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16077733	16122459	GA_x5HB7VCL79P_4:1-22697252|-	13677169	13721895	+	44727		NCBI_chr7_b31:15529418-15694744	15650024	15694744	AC005536.2:1-165327|+	120607	165327	+	44721		44590	44675/44730 (99%)	12/44730 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16122460	16128855	GA_x5HB7VCL79P_4:1-22697252|-	13670773	13677168	+	6396		NCBI_chr7_b31:15694745-15701140	15694745	15701140	AC074006.3:1-6396|+	1	6396	+	6396		6382	6389/6396 (99%)	0/6396 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16128856	16201344	GA_x5HB7VCL79P_4:1-22697252|-	13598284	13670772	+	72489		NCBI_chr7_b31:15701141-15883312	15701141	15773629	AC006035.2:1-182172|+	1	72489	+	72489		72232	72395/72503 (99%)	28/72503 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16200898	16311046	GA_x5HB7VCL79P_4:1-22697252|-	13488582	13598730	+	110149		NCBI_chr7_b31:15701141-15883312	15773151	15883312	AC006035.2:1-182172|+	72011	182172	+	110162		109950	110082/110164 (99%)	17/110164 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16311047	16344926	GA_x5HB7VCL79P_4:1-22697252|-	13454702	13488581	+	33880		NCBI_chr7_b31:15883313-15917193	15883313	15917193	AC073629.6:1-33881|+	1	33881	+	33881		33854	33873/33882 (99%)	3/33882 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16344927	16455213	GA_x5HB7VCL79P_4:1-22697252|-	13344415	13454701	+	110287		NCBI_chr7_b31:15917194-16027455	15917194	16027455	AC004741.2:1-110262|+	1	110262	+	110262		109964	110144/110289 (99%)	29/110289 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16455214	16578589	GA_x5HB7VCL79P_4:1-22697252|-	13221039	13344414	+	123376		NCBI_chr7_b31:16027456-16150827	16027456	16150827	AC079155.7:1-123372|+	1	123372	+	123372		123196	123302/123378 (99%)	8/123378 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16578590	16746624	GA_x5HB7VCL79P_4:1-22697252|-	13053004	13221038	+	168035		NCBI_chr7_b31:16150828-16318874	16150828	16318874	AC005014.2:1-168047|+	1	168047	+	168047		167714	167938/168062 (99%)	42/168062 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16746625	16807199	GA_x5HB7VCL79P_4:1-22697252|-	12992429	13053003	+	60575		NCBI_chr7_b31:16318875-16379450	16318875	16379450	AC073201.6:1-60576|+	1	60576	+	60576		60448	60532/60581 (99%)	11/60581 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16807200	16819849	GA_x5HB7VCL79P_4:1-22697252|-	12979779	12992428	+	12650		NCBI_chr7_b31:16379451-16543093	16379451	16392100	AC073333.5:1-163643|+	1	12650	+	12650		12644	12647/12650 (99%)	0/12650 (0%)
UNMATCHED	16819850	16820392					543	UNMATCHED	DELETION	16392066	16392100					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	16820393	16844822	GA_x5HB7VCL79P_4:1-22697252|-	12954806	12979235	+	24430		NCBI_chr7_b31:16379451-16543093	16392066	16416501	AC073333.5:1-163643|+	12616	37051	+	24436		24349	24401/24438 (99%)	10/24438 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16844690	16971393	GA_x5HB7VCL79P_4:1-22697252|-	12828235	12954938	+	126704		NCBI_chr7_b31:16379451-16543093	16416401	16543093	AC073333.5:1-163643|+	36951	163643	+	126693		126256	126545/126724 (99%)	51/126724 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16971394	16973338	GA_x5HB7VCL79P_4:1-22697252|-	12826290	12828234	+	1945		NCBI_chr7_b31:16543094-16711514	16543094	16545036	AC098592.5:1-168421|+	1	1943	+	1943		1907	1931/1945 (99%)	2/1945 (0%)
CRA_TCAGchr7.v1:7102376-29799627	16973288	17008944	GA_x5HB7VCL79P_4:1-22697252|-	12790684	12826340	+	35657		NCBI_chr7_b31:16543094-16711514	16545015	16580673	AC098592.5:1-168421|+	1922	37580	+	35659		35336	35531/35676 (99%)	36/35676 (0%)
DELETION	17008928	17008944					0	DELETION	UNMATCHED	16580674	16580995					337	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	17008928	17069924	GA_x5HB7VCL79P_4:1-22697252|-	12729704	12790700	+	60997		NCBI_chr7_b31:16543094-16711514	16580996	16641948	AC098592.5:1-168421|+	37903	98855	+	60953		60572	60804/61001 (99%)	52/61001 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17069167	17139511	GA_x5HB7VCL79P_4:1-22697252|-	12660117	12730461	+	70345		NCBI_chr7_b31:16543094-16711514	16641191	16711514	AC098592.5:1-168421|+	98098	168421	+	70324		70118	70260/70347 (99%)	25/70347 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17139512	17182058	GA_x5HB7VCL79P_4:1-22697252|-	12617570	12660116	+	42547		NCBI_chr7_b31:16711515-16754041	16711515	16754041	AC010749.3:201-42727|-	201	42727	+	42527		42363	42481/42559 (99%)	44/42559 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17182059	17312245	GA_x5HB7VCL79P_4:1-22697252|-	12487383	12617569	+	130187		NCBI_chr7_b31:16754042-16884232	16754042	16884232	AC073332.13:2001-132191|-	2001	132191	+	130191		129790	130065/130215 (99%)	52/130215 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17312246	17320514	GA_x5HB7VCL79P_4:1-22697252|-	12479114	12487382	+	8269		NCBI_chr7_b31:16884233-16915466	16884233	16892486	AC092099.4:1-31234|+	1	8254	+	8254		8157	8228/8274 (99%)	25/8274 (0%)
CRA_TCAGchr7.v1:17320515-17320668	17320515	17320668					154		NCBI_chr7_b31:16892487-16892623	16892487	16892623					137
CRA_TCAGchr7.v1:7102376-29799627	17320669	17343513	GA_x5HB7VCL79P_4:1-22697252|-	12456115	12478959	+	22845		NCBI_chr7_b31:16884233-16915466	16892624	16915466	AC092099.4:1-31234|+	8392	31234	+	22843		22828	22839/22845 (99%)	2/22845 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17343514	17466662	GA_x5HB7VCL79P_4:1-22697252|-	12332966	12456114	+	123149		NCBI_chr7_b31:16915467-17038602	16915467	17038602	AC003075.2:1-123136|+	1	123136	+	123136		122942	123083/123159 (99%)	33/123159 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17466663	17603688	GA_x5HB7VCL79P_4:1-22697252|-	12195940	12332965	+	137026		NCBI_chr7_b31:17038603-17175630	17038603	17175630	AC019117.4:1-137028|+	1	137028	+	137028		136588	136853/137043 (99%)	32/137043 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17603689	17611636	GA_x5HB7VCL79P_4:1-22697252|-	12187992	12195939	+	7948		NCBI_chr7_b31:17175631-17278784	17175631	17183570	AC017060.7:1-103154|+	1	7940	+	7940		7905	7932/7949 (99%)	10/7949 (0%)
UNMATCHED	17611637	17611675					39	UNMATCHED	DELETION	17183567	17183570					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	17611676	17706890	GA_x5HB7VCL79P_4:1-22697252|-	12092738	12187952	+	95215		NCBI_chr7_b31:17175631-17278784	17183567	17278784	AC017060.7:1-103154|+	7937	103154	+	95218		94687	95023/95244 (99%)	55/95244 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17706891	17844938	GA_x5HB7VCL79P_4:1-22697252|-	11954690	12092737	+	138048		NCBI_chr7_b31:17278785-17459152	17278785	17416820	AC006482.3:1-180368|+	1	138036	+	138036		137678	137922/138071 (99%)	58/138071 (0%)
VARIATION	17844939	17844945					7	VARIATION	VARIATION	17416821	17416848					28	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	17844946	17887236	GA_x5HB7VCL79P_4:1-22697252|-	11912392	11954682	+	42291		NCBI_chr7_b31:17278785-17459152	17416849	17459152	AC006482.3:1-180368|+	138065	180368	+	42304		42040	42201/42307 (99%)	19/42307 (0%)
CRA_TCAGchr7.v1:7102376-29799627	17887237	17913084	GA_x5HB7VCL79P_4:1-22697252|-	11886544	11912391	+	25848		NCBI_chr7_b31:17459153-17607066	17459153	17484997	AC073205.6:1-147914|+	1	25845	+	25845		25788	25830/25852 (99%)	11/25852 (0%)
DELETION	17913071	17913084					0	DELETION	UNMATCHED	17484998	17485021					36	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	17913071	18035114	GA_x5HB7VCL79P_4:1-22697252|-	11764514	11886557	+	122044		NCBI_chr7_b31:17459153-17607066	17485022	17607066	AC073205.6:1-147914|+	25870	147914	+	122045		121949	122021/122053 (99%)	17/122053 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18035115	18042109	GA_x5HB7VCL79P_4:1-22697252|-	11757519	11764513	+	6995		NCBI_chr7_b31:17607067-17759985	17607067	17614057	AC080080.5:1-152919|+	1	6991	+	6991		6964	6982/6995 (99%)	4/6995 (0%)
CRA_TCAGchr7.v1:18042110-18101436	18042110	18101436					59327		NCBI_chr7_b31:17614058-17673497	17614058	17673497					59440
CRA_TCAGchr7.v1:7102376-29799627	18101437	18113924	GA_x5HB7VCL79P_4:1-22697252|-	11685704	11698191	+	12488		NCBI_chr7_b31:17607067-17759985	17673498	17685955	AC080080.5:1-152919|+	66432	78889	+	12458		12307	12414/12496 (99%)	46/12496 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18103035	18187945	GA_x5HB7VCL79P_4:1-22697252|-	11611683	11696593	+	84911		NCBI_chr7_b31:17607067-17759985	17675068	17759985	AC080080.5:1-152919|+	68002	152919	+	84918		84486	84774/84942 (99%)	55/84942 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18187946	18193928	GA_x5HB7VCL79P_4:1-22697252|-	11605700	11611682	+	5983		NCBI_chr7_b31:17759986-17765966	17759986	17765966	AC092200.5:1-5981|+	1	5981	+	5981		5955	5977/5984 (99%)	4/5984 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18193929	18198344	GA_x5HB7VCL79P_4:1-22697252|-	11601284	11605699	+	4416		NCBI_chr7_b31:17765967-17810146	17765967	17770382	AC074193.6:1-44180|+	1	4416	+	4416		4416	4416/4416 (100%)	0/4416 (0%)
VARIATION	18198345	18198980					636	VARIATION	VARIATION	17770383	17770973					591	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	18198981	18199138	GA_x5HB7VCL79P_4:1-22697252|-	11600490	11600647	+	158		NCBI_chr7_b31:17765967-17810146	17770974	17771132	AC074193.6:1-44180|+	5008	5166	+	159		152	158/159 (99%)	1/159 (0%)
VARIATION	18199139	18199171					33	VARIATION	VARIATION	17771133	17771166					34	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	18199172	18217361	GA_x5HB7VCL79P_4:1-22697252|-	11582267	11600456	+	18190		NCBI_chr7_b31:17765967-17810146	17771167	17789357	AC074193.6:1-44180|+	5201	23391	+	18191		18137	18172/18192 (99%)	3/18192 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18217077	18237904	GA_x5HB7VCL79P_4:1-22697252|-	11561724	11582551	+	20828		NCBI_chr7_b31:17765967-17810146	17789316	17810146	AC074193.6:1-44180|+	23350	44180	+	20831		20772	20809/20831 (99%)	3/20831 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18237905	18398436	GA_x5HB7VCL79P_4:1-22697252|-	11401192	11561723	+	160532		NCBI_chr7_b31:17810147-17970677	17810147	17970677	AC005249.2:1-160531|+	1	160531	+	160531		160203	160420/160552 (99%)	41/160552 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18398437	18420690	GA_x5HB7VCL79P_4:1-22697252|-	11378938	11401191	+	22254		NCBI_chr7_b31:17970678-17992956	17970678	17992956	AC091697.4:1-22279|+	1	22279	+	22279		22167	22233/22279 (99%)	25/22279 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18420691	18504151	GA_x5HB7VCL79P_4:1-22697252|-	11295477	11378937	+	83461		NCBI_chr7_b31:17992957-18135791	17992957	18076411	AC010082.4:201-143035|-	59581	143035	+	83455		83209	83377/83485 (99%)	54/83485 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18503959	18534339	GA_x5HB7VCL79P_4:1-22697252|-	11265289	11295669	+	30381		NCBI_chr7_b31:17992957-18135791	18076215	18106596	AC010082.4:201-143035|-	29396	59777	+	30382		30246	30322/30383 (99%)	3/30383 (0%)
UNMATCHED	18534340	18534484					145	UNMATCHED	DELETION	18106243	18106596					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	18534485	18564023	GA_x5HB7VCL79P_4:1-22697252|-	11235605	11265143	+	29539		NCBI_chr7_b31:17992957-18135791	18106243	18135791	AC010082.4:201-143035|-	201	29749	+	29549		29412	29500/29553 (99%)	18/29553 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18564024	18703727	GA_x5HB7VCL79P_4:1-22697252|-	11095901	11235604	+	139704		NCBI_chr7_b31:18135792-18275510	18135792	18275510	AC002433.2:201-139919|-	201	139919	+	139719		139482	139635/139728 (99%)	33/139728 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18703728	18804642	GA_x5HB7VCL79P_4:1-22697252|-	10994986	11095900	+	100915		NCBI_chr7_b31:18275511-18376427	18275511	18376427	AC002124.2:7-100923|-	7	100923	+	100917		100760	100858/100921 (99%)	10/100921 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18804643	18856507	GA_x5HB7VCL79P_4:1-22697252|-	10943121	10994985	+	51865		NCBI_chr7_b31:18376428-18461860	18376428	18428257	AC002088.2:201-85633|-	33804	85633	+	51830		51626	51759/51867 (99%)	39/51867 (0%)
DELETION	18856189	18856507					0	DELETION	UNMATCHED	18428258	18429492					1552	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	18856189	18888544	GA_x5HB7VCL79P_4:1-22697252|-	10911084	10943439	+	32356		NCBI_chr7_b31:18376428-18461860	18429493	18461860	AC002088.2:201-85633|-	201	32568	+	32368		32318	32348/32368 (99%)	12/32368 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18888545	18984531	GA_x5HB7VCL79P_4:1-22697252|-	10815097	10911083	+	95987		NCBI_chr7_b31:18461861-18557877	18461861	18557877	AC002410.2:201-96217|-	201	96217	+	96017		95515	95820/96030 (99%)	56/96030 (0%)
CRA_TCAGchr7.v1:7102376-29799627	18984532	19064635	GA_x5HB7VCL79P_4:1-22697252|-	10734993	10815096	+	80104		NCBI_chr7_b31:18557878-18638008	18557878	18638008	AC004994.1:201-80331|-	201	80331	+	80131		79876	80031/80136 (99%)	37/80136 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19064636	19150047	GA_x5HB7VCL79P_4:1-22697252|-	10649581	10734992	+	85412		NCBI_chr7_b31:18638009-18723387	18638009	18723387	AC004744.1:201-85579|-	201	85579	+	85379		85109	85287/85420 (99%)	49/85420 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19150048	19167757	GA_x5HB7VCL79P_4:1-22697252|-	10631871	10649580	+	17710		NCBI_chr7_b31:18723388-18749534	18723388	18741097	AC003073.2:201-26347|-	8638	26347	+	17710		17613	17670/17712 (99%)	4/17712 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19167697	19176147	GA_x5HB7VCL79P_4:1-22697252|-	10623481	10631931	+	8451		NCBI_chr7_b31:18723388-18749534	18741083	18749534	AC003073.2:201-26347|-	201	8652	+	8452		8388	8428/8453 (99%)	3/8453 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19176148	19364148	GA_x5HB7VCL79P_4:1-22697252|-	10435480	10623480	+	188001		NCBI_chr7_b31:18749535-18937539	18749535	18937539	AC003986.2:201-188205|-	201	188205	+	188005		187842	187957/188012 (99%)	18/188012 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19364149	19418587	GA_x5HB7VCL79P_4:1-22697252|-	10381041	10435479	+	54439		NCBI_chr7_b31:18937540-19084059	18937540	18991984	AC006381.2:201-146720|-	92276	146720	+	54445		54363	54416/54449 (99%)	14/54449 (0%)
DELETION	19418524	19418587					0	DELETION	UNMATCHED	18991985	18991986					64	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	19418524	19510579	GA_x5HB7VCL79P_4:1-22697252|-	10289049	10381104	+	92056		NCBI_chr7_b31:18937540-19084059	18991987	19084059	AC006381.2:201-146720|-	201	92273	+	92073		91660	91918/92086 (99%)	43/92086 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19510580	19534851	GA_x5HB7VCL79P_4:1-22697252|-	10264777	10289048	+	24272		NCBI_chr7_b31:19084060-19258186	19084060	19108331	AC007091.3:201-174327|-	150056	174327	+	24272		24196	24245/24274 (99%)	4/24274 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19534831	19684741	GA_x5HB7VCL79P_4:1-22697252|-	10114887	10264797	+	149911		NCBI_chr7_b31:19084060-19258186	19108287	19258186	AC007091.3:201-174327|-	201	150100	+	149900		149236	149638/149935 (99%)	59/149935 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19684742	19776005	GA_x5HB7VCL79P_4:1-22697252|-	10023623	10114886	+	91264		NCBI_chr7_b31:19258187-19349446	19258187	19349446	AC006397.1:201-91460|-	201	91460	+	91260		90949	91137/91270 (99%)	16/91270 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19776006	19826315	GA_x5HB7VCL79P_4:1-22697252|-	9973313	10023622	+	50310		NCBI_chr7_b31:19349447-19399754	19349447	19399754	AC004940.1:201-50508|-	201	50508	+	50308		50290	50305/50310 (99%)	2/50310 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19826316	19936179	GA_x5HB7VCL79P_4:1-22697252|-	9863449	9973312	+	109864		NCBI_chr7_b31:19399755-19521675	19399755	19509619	AC004543.2:201-122121|-	12257	122121	+	109865		109598	109771/109879 (99%)	29/109879 (0%)
DELETION	19936065	19936179					0	DELETION	UNMATCHED	19509620	19509660					154	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	19936065	19948090	GA_x5HB7VCL79P_4:1-22697252|-	9851538	9863563	+	12026		NCBI_chr7_b31:19399755-19521675	19509661	19521675	AC004543.2:201-122121|-	201	12215	+	12015		11872	11957/12027 (99%)	13/12027 (0%)
CRA_TCAGchr7.v1:7102376-29799627	19948091	20026676	GA_x5HB7VCL79P_4:1-22697252|-	9772952	9851537	+	78586		NCBI_chr7_b31:19521676-19600269	19521676	19600269	AC003990.2:201-78794|-	201	78794	+	78594		78314	78486/78603 (99%)	26/78603 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20026677	20052712	GA_x5HB7VCL79P_4:1-22697252|-	9746916	9772951	+	26036		NCBI_chr7_b31:19600270-19719996	19600270	19626307	AC005062.1:201-119927|-	93890	119927	+	26038		25852	25963/26044 (99%)	14/26044 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20052576	20067177	GA_x5HB7VCL79P_4:1-22697252|-	9732451	9747052	+	14602		NCBI_chr7_b31:19600270-19719996	19626082	19640671	AC005062.1:201-119927|-	79526	94115	+	14590		14321	14473/14610 (99%)	28/14610 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20052583	20146490	GA_x5HB7VCL79P_4:1-22697252|-	9653138	9747045	+	93908		NCBI_chr7_b31:19600270-19719996	19626085	19719996	AC005062.1:201-119927|-	201	94112	+	93912		93418	93715/93937 (99%)	54/93937 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20146491	20254713	GA_x5HB7VCL79P_4:1-22697252|-	9544915	9653137	+	108223		NCBI_chr7_b31:19719997-19828214	19719997	19828214	AC007001.2:201-108418|-	201	108418	+	108218		107935	108122/108234 (99%)	27/108234 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20254714	20398989	GA_x5HB7VCL79P_4:1-22697252|-	9400639	9544914	+	144276		NCBI_chr7_b31:19828215-19972499	19828215	19972499	AC005083.1:2001-146285|-	2001	146285	+	144285		144217	144259/144286 (99%)	11/144286 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20398990	20426728	GA_x5HB7VCL79P_4:1-22697252|-	9372900	9400638	+	27739		NCBI_chr7_b31:19972500-20000251	19972500	20000251	AC099342.5:1-27752|+	1	27752	+	27752		27668	27718/27753 (99%)	15/27753 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20426729	20542756	GA_x5HB7VCL79P_4:1-22697252|-	9256872	9372899	+	116028		NCBI_chr7_b31:20000252-20116266	20000252	20116266	AC004130.1:1-116015|+	1	116015	+	116015		115540	115857/116064 (99%)	85/116064 (0%)
CRA_TCAGchr7.v1:20542757-20576464	20542757	20576464					33708		NCBI_chr7_b31:20116267-20149992	20116267	20149992					33726
CRA_TCAGchr7.v1:7102376-29799627	20576465	20678595	GA_x5HB7VCL79P_4:1-22697252|-	9121033	9223163	+	102131		NCBI_chr7_b31:20116267-20253883	20149993	20252116	AC003091.1:1-137617|+	33727	135850	+	102124		101870	102042/102144 (99%)	33/102144 (0%)
VARIATION	20678596	20681676					3081	VARIATION	VARIATION	20252117	20254968					2852	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	20681677	20696890	GA_x5HB7VCL79P_4:1-22697252|-	9102738	9117951	+	15214		NCBI_chr7_b31:20253884-20270183	20254969	20270183	AC007095.4:1-16300|+	1086	16300	+	15215		15176	15198/15215 (99%)	1/15215 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20696891	20697708	GA_x5HB7VCL79P_4:1-22697252|-	9101920	9102737	+	818		NCBI_chr7_b31:20270184-20349594	20270184	20271000	AC002486.1:1-79411|+	1	817	+	817		766	801/821 (97%)	7/821 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20697707	20721343	GA_x5HB7VCL79P_4:1-22697252|-	9078285	9101921	+	23637		NCBI_chr7_b31:20270184-20349594	20271000	20294635	AC002486.1:1-79411|+	817	24452	+	23636		23620	23631/23637 (99%)	1/23637 (0%)
UNMATCHED	20721344	20721366					23	UNMATCHED	DELETION	20294635	20294635					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	20721367	20775399	GA_x5HB7VCL79P_4:1-22697252|-	9024229	9078261	+	54033		NCBI_chr7_b31:20270184-20349594	20294635	20348682	AC002486.1:1-79411|+	24452	78499	+	54048		53829	53966/54053 (99%)	25/54053 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20775369	20776291	GA_x5HB7VCL79P_4:1-22697252|-	9023337	9024259	+	923		NCBI_chr7_b31:20270184-20349594	20348672	20349594	AC002486.1:1-79411|+	78489	79411	+	923		919	921/923 (99%)	0/923 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20776292	20791761	GA_x5HB7VCL79P_4:1-22697252|-	9007867	9023336	+	15470		NCBI_chr7_b31:20349595-20469563	20349595	20365069	AC005060.3:1-119969|+	1	15475	+	15475		15332	15417/15477 (99%)	9/15477 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20791630	20896295	GA_x5HB7VCL79P_4:1-22697252|-	8903333	9007998	+	104666		NCBI_chr7_b31:20349595-20469563	20364961	20469563	AC005060.3:1-119969|+	15367	119969	+	104603		103316	104245/104724 (99%)	179/104724 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20896296	20988731	GA_x5HB7VCL79P_4:1-22697252|-	8810897	8903332	+	92436		NCBI_chr7_b31:20469564-20561999	20469564	20561999	AC005251.1:1-92436|+	1	92436	+	92436		92226	92362/92443 (99%)	14/92443 (0%)
CRA_TCAGchr7.v1:7102376-29799627	20988732	21054973	GA_x5HB7VCL79P_4:1-22697252|-	8744655	8810896	+	66242		NCBI_chr7_b31:20562000-20628232	20562000	20628232	AC007090.3:1-66233|+	1	66233	+	66233		66111	66187/66243 (99%)	11/66243 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21054974	21115584	GA_x5HB7VCL79P_4:1-22697252|-	8684044	8744654	+	60611		NCBI_chr7_b31:20628233-20688855	20628233	20688855	AC080068.6:1-60623|+	1	60623	+	60623		60395	60543/60631 (99%)	28/60631 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21115585	21168543	GA_x5HB7VCL79P_4:1-22697252|-	8631085	8684043	+	52959		NCBI_chr7_b31:20688856-20836907	20688856	20741817	AC006481.3:2001-150052|-	97091	150052	+	52962		52855	52922/52969 (99%)	17/52969 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21168532	21263629	GA_x5HB7VCL79P_4:1-22697252|-	8535999	8631096	+	95098		NCBI_chr7_b31:20688856-20836907	20741805	20836907	AC006481.3:2001-150052|-	2001	97103	+	95103		94874	95022/95115 (99%)	29/95115 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21263630	21278443	GA_x5HB7VCL79P_4:1-22697252|-	8521185	8535998	+	14814		NCBI_chr7_b31:20836908-20851718	20836908	20851718	AC093649.4:1-14811|+	1	14811	+	14811		14779	14804/14814 (99%)	3/14814 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21278444	21319442	GA_x5HB7VCL79P_4:1-22697252|-	8480186	8521184	+	40999		NCBI_chr7_b31:20851719-20935416	20851719	20892739	AC078791.8:1-83698|+	1	41021	+	41021		40880	40970/41025 (99%)	30/41025 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21314621	21362119	GA_x5HB7VCL79P_4:1-22697252|-	8437509	8485007	+	47499		NCBI_chr7_b31:20851719-20935416	20887916	20935416	AC078791.8:1-83698|+	36198	83698	+	47501		47218	47395/47517 (99%)	34/47517 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21362120	21438320	GA_x5HB7VCL79P_4:1-22697252|-	8361308	8437508	+	76201		NCBI_chr7_b31:20935417-21093294	20935417	21011609	AC005094.1:1-157878|+	1	76193	+	76193		75816	76058/76220 (99%)	46/76220 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21438301	21503167	GA_x5HB7VCL79P_4:1-22697252|-	8296461	8361327	+	64867		NCBI_chr7_b31:20935417-21093294	21011558	21076442	AC005094.1:1-157878|+	76142	141026	+	64885		64616	64782/64893 (99%)	34/64893 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21503136	21520004	GA_x5HB7VCL79P_4:1-22697252|-	8279624	8296492	+	16869		NCBI_chr7_b31:20935417-21093294	21076439	21093294	AC005094.1:1-157878|+	141023	157878	+	16856		16764	16830/16871 (99%)	17/16871 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21520005	21654163	GA_x5HB7VCL79P_4:1-22697252|-	8145465	8279623	+	134159		NCBI_chr7_b31:21093295-21227464	21093295	21227464	AC004595.1:1-134170|+	1	134170	+	134170		133957	134091/134180 (99%)	31/134180 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21654164	21692751	GA_x5HB7VCL79P_4:1-22697252|-	8106877	8145464	+	38588		NCBI_chr7_b31:21227465-21266051	21227465	21266051	AC102952.3:1-38587|+	1	38587	+	38587		38546	38575/38589 (99%)	3/38589 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21692752	21773578	GA_x5HB7VCL79P_4:1-22697252|-	8026050	8106876	+	80827		NCBI_chr7_b31:21266052-21346860	21266052	21346860	AC073102.2:1-80809|+	1	80809	+	80809		80561	80725/80834 (99%)	32/80834 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21773579	21803882	GA_x5HB7VCL79P_4:1-22697252|-	7995746	8026049	+	30304		NCBI_chr7_b31:21346861-21377160	21346861	21377160	AC013481.4:1-30300|+	1	30300	+	30300		30252	30283/30304 (99%)	4/30304 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21803883	21876897	GA_x5HB7VCL79P_4:1-22697252|-	7922731	7995745	+	73015		NCBI_chr7_b31:21377161-21450191	21377161	21450191	AC005078.1:1-73031|+	1	73031	+	73031		72629	72857/73045 (99%)	44/73045 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21876898	21987194	GA_x5HB7VCL79P_4:1-22697252|-	7812434	7922730	+	110297		NCBI_chr7_b31:21450192-21560506	21450192	21560506	AC004002.1:1-110315|+	1	110315	+	110315		109738	110119/110350 (99%)	88/110350 (0%)
CRA_TCAGchr7.v1:7102376-29799627	21987195	22011105	GA_x5HB7VCL79P_4:1-22697252|-	7788523	7812433	+	23911		NCBI_chr7_b31:21560507-21607133	21560507	21584399	AC099653.5:1-46627|+	1	23893	+	23893		23812	23878/23914 (99%)	24/23914 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22011101	22021716	GA_x5HB7VCL79P_4:1-22697252|-	7777912	7788527	+	10616		NCBI_chr7_b31:21560507-21607133	21584344	21594983	AC099653.5:1-46627|+	23838	34477	+	10640		10536	10603/10640 (99%)	24/10640 (0%)
DELETION	22021701	22021716					0	DELETION	UNMATCHED	21594984	21594992					23	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	22021701	22033846	GA_x5HB7VCL79P_4:1-22697252|-	7765782	7777927	+	12146		NCBI_chr7_b31:21560507-21607133	21594993	21607133	AC099653.5:1-46627|+	34487	46627	+	12141		12095	12129/12148 (99%)	9/12148 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22033847	22060642	GA_x5HB7VCL79P_4:1-22697252|-	7738986	7765781	+	26796		NCBI_chr7_b31:21607134-21633929	21607134	21633929	AC074379.5:1-26796|+	1	26796	+	26796		26690	26768/26801 (99%)	10/26801 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22060643	22273798	GA_x5HB7VCL79P_4:1-22697252|-	7525830	7738985	+	213156		NCBI_chr7_b31:21633930-22047180	21633930	21847119	AC005079.6:1-413251|+	1	213190	+	213190		212618	212994/213210 (99%)	74/213210 (0%)
DELETION	22273754	22273798					0	DELETION	UNMATCHED	21847120	21847182					106	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	22273754	22318954	GA_x5HB7VCL79P_4:1-22697252|-	7480674	7525874	+	45201		NCBI_chr7_b31:21633930-22047180	21847183	21892384	AC005079.6:1-413251|+	213254	258455	+	45202		45110	45165/45205 (99%)	7/45205 (0%)
VARIATION	22318955	22319102					148	VARIATION	VARIATION	21892385	21892504					120	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	22319103	22473774	GA_x5HB7VCL79P_4:1-22697252|-	7325854	7480525	+	154672		NCBI_chr7_b31:21633930-22047180	21892505	22047180	AC005079.6:1-413251|+	258576	413251	+	154676		154284	154558/154697 (99%)	46/154697 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22473775	22489387	GA_x5HB7VCL79P_4:1-22697252|-	7310241	7325853	+	15613		NCBI_chr7_b31:22047181-22062794	22047181	22062794	AC099759.4:1-15614|+	1	15614	+	15614		15552	15594/15616 (99%)	5/15616 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22489388	22505708	GA_x5HB7VCL79P_4:1-22697252|-	7293920	7310240	+	16321		NCBI_chr7_b31:22062795-22177422	22062795	22079117	AC005061.2:1-114628|+	1	16323	+	16323		16296	16315/16324 (99%)	4/16324 (0%)
UNMATCHED	22505709	22507665					1957	UNMATCHED	DELETION	22079115	22079117					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	22507666	22601457	GA_x5HB7VCL79P_4:1-22697252|-	7198171	7291962	+	93792		NCBI_chr7_b31:22062795-22177422	22079115	22172922	AC005061.2:1-114628|+	16321	110128	+	93808		93610	93742/93814 (99%)	28/93814 (0%)
VARIATION	22601458	22682254					80797	VARIATION	VARIATION	22172923	22216247					43325	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	22682255	22841608	GA_x5HB7VCL79P_4:1-22697252|-	6958020	7117373	+	159354		NCBI_chr7_b31:22177423-22375589	22216248	22375589	AC002480.1:1-198167|+	38826	198167	+	159342		158802	159157/159377 (99%)	58/159377 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22841609	22851698	GA_x5HB7VCL79P_4:1-22697252|-	6947930	6958019	+	10090		NCBI_chr7_b31:22375590-22397865	22375590	22385677	AC091800.4:1-22276|+	1	10088	+	10088		10048	10077/10091 (99%)	4/10091 (0%)
DELETION	22851278	22851698					0	DELETION	UNMATCHED	22385678	22390804					5546	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	22851278	22858338	GA_x5HB7VCL79P_4:1-22697252|-	6941290	6948350	+	7061		NCBI_chr7_b31:22375590-22397865	22390805	22397865	AC091800.4:1-22276|+	15216	22276	+	7061		7053	7057/7061 (99%)	0/7061 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22858339	22947546	GA_x5HB7VCL79P_4:1-22697252|-	6852082	6941289	+	89208		NCBI_chr7_b31:22397866-22487057	22397866	22487057	AC073072.11:1-89192|+	1	89192	+	89192		88947	89118/89229 (99%)	58/89229 (0%)
UNMATCHED	22947547	22947548					2	UNMATCHED	DELETION	22487057	22487058					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	22947549	22953007	GA_x5HB7VCL79P_4:1-22697252|-	6846621	6852079	+	5459	INVERSION	NCBI_chr7_b31:22487058-22648996	22487058	22492516	AC005682.2:201-162139|-	156681	162139	-	5459	INVERSION	5459	5459/5459 (100%)	0/5459 (0%)
CRA_TCAGchr7.v1:7102376-29799627	22953008	22984332	GA_x5HB7VCL79P_4:1-22697252|-	6815296	6846620	+	31325		NCBI_chr7_b31:22487058-22648996	22492517	22523845	AC005682.2:201-162139|-	125352	156680	+	31329		31216	31284/31332 (99%)	10/31332 (0%)
UNMATCHED	22984333	22984798					466	UNMATCHED	DELETION	22523586	22523845					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	22984799	23110212	GA_x5HB7VCL79P_4:1-22697252|-	6689416	6814829	+	125414		NCBI_chr7_b31:22487058-22648996	22523586	22648996	AC005682.2:201-162139|-	201	125611	+	125411		124961	125273/125440 (99%)	55/125440 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23110213	23194268	GA_x5HB7VCL79P_4:1-22697252|-	6605360	6689415	+	84056		NCBI_chr7_b31:22648997-22825053	22648997	22733064	AC006039.3:1-176057|+	1	84068	+	84068		83546	83873/84095 (99%)	66/84095 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23194046	23286284	GA_x5HB7VCL79P_4:1-22697252|-	6513344	6605582	+	92239		NCBI_chr7_b31:22648997-22825053	22732814	22825053	AC006039.3:1-176057|+	83818	176057	+	92240		92023	92149/92245 (99%)	11/92245 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23286285	23306613	GA_x5HB7VCL79P_4:1-22697252|-	6493015	6513343	+	20329		NCBI_chr7_b31:22825054-22845374	22825054	22845374	AC073992.3:1-20321|+	1	20321	+	20321		20157	20265/20338 (99%)	26/20338 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23306614	23476147	GA_x5HB7VCL79P_4:1-22697252|-	6323481	6493014	+	169534		NCBI_chr7_b31:22845375-23014913	22845375	23014913	AC005082.3:1-169539|+	1	169539	+	169539		169365	169487/169549 (99%)	25/169549 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23476148	23578786	GA_x5HB7VCL79P_4:1-22697252|-	6220842	6323480	+	102639		NCBI_chr7_b31:23014914-23117585	23014914	23117585	AC021876.5:1-102672|+	1	102672	+	102672		102416	102576/102676 (99%)	41/102676 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23578787	23631171	GA_x5HB7VCL79P_4:1-22697252|-	6168457	6220841	+	52385		NCBI_chr7_b31:23117586-23169964	23117586	23169964	AC079780.6:1-52379|+	1	52379	+	52379		52236	52336/52391 (99%)	18/52391 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23631172	23654520	GA_x5HB7VCL79P_4:1-22697252|-	6145108	6168456	+	23349		NCBI_chr7_b31:23169965-23240640	23169965	23193306	AC023105.7:1-70676|+	1	23342	+	23342		23234	23314/23354 (99%)	17/23354 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23654486	23701829	GA_x5HB7VCL79P_4:1-22697252|-	6097799	6145142	+	47344		NCBI_chr7_b31:23169965-23240640	23193298	23240640	AC023105.7:1-70676|+	23334	70676	+	47343		47269	47318/47347 (99%)	7/47347 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23701830	23851472	GA_x5HB7VCL79P_4:1-22697252|-	5948156	6097798	+	149643		NCBI_chr7_b31:23240641-23390309	23240641	23390309	AC006026.2:1-149669|+	1	149669	+	149669		149200	149513/149686 (99%)	60/149686 (0%)
CRA_TCAGchr7.v1:7102376-29799627	23851473	23941443	GA_x5HB7VCL79P_4:1-22697252|-	5858185	5948155	+	89971		NCBI_chr7_b31:23390310-23480289	23390310	23480289	AC008176.3:1-89980|+	1	89980	+	89980		89576	89830/89994 (99%)	37/89994 (0%)
CRA_TCAGchr7.v1:23941444-23984438	23941444	23984438					42995		NCBI_chr7_b31:23480290-23523257	23480290	23523257					42968
CRA_TCAGchr7.v1:7102376-29799627	23984439	23994495	GA_x5HB7VCL79P_4:1-22697252|-	5805133	5815189	+	10057		NCBI_chr7_b31:23480290-23583655	23523258	23533311	AC003087.2:1-103366|+	42969	53022	+	10054		10016	10044/10057 (99%)	3/10057 (0%)
UNMATCHED	23994496	23994546					51	UNMATCHED	DELETION	23533302	23533311					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	23994547	24044900	GA_x5HB7VCL79P_4:1-22697252|-	5754728	5805081	+	50354		NCBI_chr7_b31:23480290-23583655	23533302	23583655	AC003087.2:1-103366|+	53013	103366	+	50354		50157	50286/50365 (99%)	22/50365 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24044901	24164114	GA_x5HB7VCL79P_4:1-22697252|-	5635514	5754727	+	119214		NCBI_chr7_b31:23583656-23702869	23583656	23702869	AC009508.3:1-119214|+	1	119214	+	119214		119033	119152/119226 (99%)	24/119226 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24164115	24272089	GA_x5HB7VCL79P_4:1-22697252|-	5527539	5635513	+	107975		NCBI_chr7_b31:23702870-23810851	23702870	23810851	AC009308.3:1-107982|+	1	107982	+	107982		107803	107917/107986 (99%)	15/107986 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24272090	24457405	GA_x5HB7VCL79P_4:1-22697252|-	5342223	5527538	+	185316		NCBI_chr7_b31:23810852-23996167	23810852	23996167	AC004485.2:1-185316|+	1	185316	+	185316		184318	184968/185378 (99%)	124/185378 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24457406	24458278	GA_x5HB7VCL79P_4:1-22697252|-	5341350	5342222	+	873		NCBI_chr7_b31:23996168-23997040	23996168	23997040	AC005097.1:1-873|+	1	873	+	873		871	872/873 (99%)	0/873 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24458279	24539325	GA_x5HB7VCL79P_4:1-22697252|-	5260303	5341349	+	81047		NCBI_chr7_b31:23997041-24078071	23997041	24078071	AC003044.1:1-81031|+	1	81031	+	81031		80822	80955/81053 (99%)	28/81053 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24539326	24648516	GA_x5HB7VCL79P_4:1-22697252|-	5151112	5260302	+	109191		NCBI_chr7_b31:24078072-24187260	24078072	24187260	AC002530.1:1-109189|+	1	109189	+	109189		109015	109130/109210 (99%)	40/109210 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24648517	24658827	GA_x5HB7VCL79P_4:1-22697252|-	5140801	5151111	+	10311		NCBI_chr7_b31:24187261-24197564	24187261	24197564	AC079878.6:1-10304|+	1	10304	+	10304		10238	10292/10316 (99%)	17/10316 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24658828	24781478	GA_x5HB7VCL79P_4:1-22697252|-	5018150	5140800	+	122651		NCBI_chr7_b31:24197565-24375459	24197565	24320224	AC005084.2:1-177895|+	1	122660	+	122660		122417	122570/122678 (99%)	45/122678 (0%)
DELETION	24781462	24781478					0	DELETION	UNMATCHED	24320225	24320530					321	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	24781462	24836385	GA_x5HB7VCL79P_4:1-22697252|-	4963243	5018166	+	54924		NCBI_chr7_b31:24197565-24375459	24320531	24375459	AC005084.2:1-177895|+	122967	177895	+	54929		54766	54871/54941 (99%)	29/54941 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24836386	24958199	GA_x5HB7VCL79P_4:1-22697252|-	4841429	4963242	+	121814		NCBI_chr7_b31:24375460-24497259	24375460	24497259	AC003093.1:1-121800|+	1	121800	+	121800		121608	121747/121826 (99%)	38/121826 (0%)
CRA_TCAGchr7.v1:7102376-29799627	24958200	25069942	GA_x5HB7VCL79P_4:1-22697252|-	4729686	4841428	+	111743		NCBI_chr7_b31:24497260-24609001	24497260	24609001	AC004016.1:1-111742|+	1	111742	+	111742		111557	111691/111755 (99%)	25/111755 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25069943	25075230	GA_x5HB7VCL79P_4:1-22697252|-	4724398	4729685	+	5288		NCBI_chr7_b31:24609002-24614288	24609002	24614288	AC004239.1:1-5287|+	1	5287	+	5287		5257	5275/5288 (99%)	1/5288 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25075231	25114601	GA_x5HB7VCL79P_4:1-22697252|-	4685027	4724397	+	39371		NCBI_chr7_b31:24614289-24704477	24614289	24653656	AC004008.2:1-90189|+	1	39368	+	39368		39192	39302/39377 (99%)	15/39377 (0%)
DELETION	25114600	25114601					0	DELETION	UNMATCHED	24653657	24653675					19	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	25114600	25147811	GA_x5HB7VCL79P_4:1-22697252|-	4651817	4685028	+	33212		NCBI_chr7_b31:24614289-24704477	24653676	24686895	AC004008.2:1-90189|+	39388	72607	+	33220		33060	33167/33224 (99%)	16/33224 (0%)
DELETION	25147800	25147811					0	DELETION	UNMATCHED	24686896	24687212					327	UNMATCHED
CRA_TCAGchr7.v1:7102376-29799627	25147800	25165067	GA_x5HB7VCL79P_4:1-22697252|-	4634561	4651828	+	17268		NCBI_chr7_b31:24614289-24704477	24687213	24704477	AC004008.2:1-90189|+	72925	90189	+	17265		17234	17256/17268 (99%)	3/17268 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25165068	25180827	GA_x5HB7VCL79P_4:1-22697252|-	4618801	4634560	+	15760		NCBI_chr7_b31:24704478-24720239	24704478	24720239	AC079876.5:1-15762|+	1	15762	+	15762		15728	15750/15762 (99%)	2/15762 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25180828	25244395	GA_x5HB7VCL79P_4:1-22697252|-	4555233	4618800	+	63568		NCBI_chr7_b31:24720240-24783788	24720240	24783788	AC004694.1:1-63549|+	1	63549	+	63549		63333	63485/63577 (99%)	37/63577 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25244396	25267180	GA_x5HB7VCL79P_4:1-22697252|-	4532448	4555232	+	22785		NCBI_chr7_b31:24783789-24806767	24783789	24806573	AC007487.2:1-22979|+	1	22785	+	22785		22734	22776/22788 (99%)	6/22788 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25267180	25267306	GA_x5HB7VCL79P_4:1-22697252|-	4532322	4532448	+	127		NCBI_chr7_b31:24783789-24806767	24806455	24806581	AC007487.2:1-22979|+	22667	22793	+	127		121	124/127 (97%)	0/127 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25267300	25267610	GA_x5HB7VCL79P_4:1-22697252|-	4532018	4532328	+	311		NCBI_chr7_b31:24783789-24806767	24806457	24806767	AC007487.2:1-22979|+	22669	22979	+	311		305	308/311 (99%)	0/311 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25267611	25302988	GA_x5HB7VCL79P_4:1-22697252|-	4496640	4532017	+	35378		NCBI_chr7_b31:24806768-24969268	24806768	24842158	AC004129.2:1-162501|+	1	35391	+	35391		35215	35324/35393 (99%)	17/35393 (0%)
VARIATION	25302989	25303037					49	VARIATION	VARIATION	24842159	24842161					3	VARIATION
CRA_TCAGchr7.v1:7102376-29799627	25303038	25304576	GA_x5HB7VCL79P_4:1-22697252|-	4495052	4496590	+	1539		NCBI_chr7_b31:24806768-24969268	24842162	24843700	AC004129.2:1-162501|+	35395	36933	+	1539		1537	1538/1539 (99%)	0/1539 (0%)
UNMATCHED	25304577	25304591					15	UNMATCHED	DELETION	24843695	24843700					0	DELETION
CRA_TCAGchr7.v1:7102376-29799627	25304592	25356458	GA_x5HB7VCL79P_4:1-22697252|-	4443170	4495036	+	51867		NCBI_chr7_b31:24806768-24969268	24843695	24895562	AC004129.2:1-162501|+	36928	88795	+	51868		51621	51764/51877 (99%)	19/51877 (0%)
CRA_TCAGchr7.v1:25356459-25401451	25356459	25401451					44993		NCBI_chr7_b31:24895563-24940794	24895563	24940794					45232
CRA_TCAGchr7.v1:7102376-29799627	25401452	25401567	GA_x5HB7VCL79P_4:1-22697252|-	4398061	4398176	+	116		NCBI_chr7_b31:24806768-24969268	24940795	24940910	AC004129.2:1-162501|+	134028	134143	+	116		110	113/116 (97%)	0/116 (0%)
CRA_TCAGchr7.v1:25401568-25406717	25401568	25406717					5150		NCBI_chr7_b31:24940911-24946088	24940911	24946088					5178
CRA_TCAGchr7.v1:7102376-29799627	25406718	25429899	GA_x5HB7VCL79P_4:1-22697252|-	4369729	4392910	+	23182		NCBI_chr7_b31:24806768-24969268	24946089	24969268	AC004129.2:1-162501|+	139322	162501	+	23180		23128	23169/23185 (99%)	8/23185 (0%)
CRA_TCAGchr7.v1:7102376-29799627	25429900	25534179	GA_x5HB7VCL79P_4:1-22697252|-	4265449	4369728	+	104280		NCBI_chr7_b31:24969269-25073560	24969269	25073560	AC003985.2:1-104292|+	1	104292	+	104292		103836	104121/104316 (99%)	60/104316 (0%)