The Chromosome 7 Annotation Project
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TCAG Gene Summary: LFNG [GA0179]

Gene / Transcript Structure
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General information
Class Known_Gene
TCAG Gene ID GA0179 [Old ID: HSC7000179]
Gene Symbol LFNG [HUGO ID: LFNG]
Gene Name Lunatic fringe homolog (Drosophila)
Synonyms  
Omim Lunatic fringe | 602576
Gene Ontology ●Biological process
   Development [GO:0007275]
●Cellular component
   Golgi apparatus [GO:0005794]
   Integral to membrane [GO:0016021]
●Molecular function
   Transferase activity, transferring glycosyl groups [GO:0016757]
Transcript LFNG | T00166 | BC014851.1
LFNG_transcript_variant_1 | T02318 | AK096284.1
LFNG_transcript_variant_2 | T02828 | AF193612.1
External links
LocusLink 3955
RefSeq  
GenBank AF193612 [mRNA]
AK096284 [mRNA]
BC014851 [mRNA]
U94354 [mRNA]
PubMed 14702039, 12477932, 10341080, 9878264, 9187150
ABI Gene Expression "Assays-on-Demand™" Hs00385431_m1
Hs00403139_m1
Affymetrix GeneChip U133A
U133B
U95A|31908_at
Transcript Sequence(s)
>T00166 Gene_ID:GA0179,Symbol:LFNG,Class:Known_Gene,BaseSeq:BC014851.1
GGAGGGTTTTGCTCTTTGTGTGGGTGTGTGAGTGGCTATGATCCTAGTTGTCCAGCTGCTGCGTGGAGAATAAGTAAAGC
AGGTCTGAATGACACCAGGTCGCTGCTGTCTTGCGGCTGACATTCAGGTAGAGACGTTCATCTTCACTGACGGGGAAGAT
GAGGCCCTGGCCAGGCACACGGGCAACGTGGTCATCACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA
GATGGCCGTGGAGTATGACCGCTTCATCGAGTCCGGCAGGAAGTGGTTCTGCCACGTGGACGATGACAACTACGTCAACC
TGCGGGCCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCC
ATCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCACGGGCGGCGCTGGCTTCTG
CATCAGCCGTGGGCTGGCTCTGAAGATGAGCCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGCGGATCCGGC
TGCCTGATGACTGCACCATCGGCTACATCGTGGAGGCCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCTTCCACTCC
CACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCTGAGCTACGGTATGTTTGAAAACAA
GCGGAACGCCGTCCACGTGAAGGGGCCCTTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT
ACCCGGACACACCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTA
TCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTGC
GTGTGCATGTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGAGG
GGCGGGCACCAGCGCCACTTATGTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGGAAGGATTTGTGT
GTCGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGCTACTTTGCAGG
GATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
CCTGTGTCATAGCCCCAAGTACGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCTGGGGGTGCGTGACCCAAT
CCCCTTCCTCCTGGCCTGGACGCTGTGGCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCC
AGTGGCTGGCTGTCCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGGGAGTCTTCCAGGCCTCCTCAGA
GGTCTTCCCTTTGCCTCCCCAGGACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGC
CCACAGTGGGCGTGTCTGTAAATATTGTGACAGTATTTTTTTACTGTGCTGTTTTTTTTGAAAGGGGATGGGTAAAAAGT
AGGGTGTTCTTGTTTTTTGCTTGGGAGGGTGGGGGTGGGGGAGGGTCTTATTTTATCTTATCTTTTCTGTGGATCAGAAA
AAACAGAAGCCAAACTCGGGGTCATCTTTGTTTTTAAAGCTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTC
CAGCATCTGGAACCTCCCATCCCTGCCCTCCTCCTGTGTAGCTGCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTC
CCGTGGGCTGTGTTTCTTGTTGTTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGG
GAATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

>T02318 Gene_ID:GA0179,Symbol:LFNG_transcript_variant_1,Class:Known_Gene,BaseSeq:AK096284.1
AGACTAAGCTGCAACACTGGCAGAGCCTCCCAAGGAAGGGAGGAGGGAGGACAGAGGCCAAGGCGGCTCCTGGCCACCCT
CGCAGCTTCCTCCCTCCCTGGCCACAAGGACCCAAAGCTCAGAGGGATGGATGAACAGACAGGAAGGCTCAGGCTGGACA
CGTATTGTATGAGTGCCAAGCAGATCTGGGCATGGAGCAAATGCTCAGGAAGGCTGTGGGATGAGCACATGAAATGGATG
GAAGGATGGACGGACAGATGGACAGATGGATGGATGGATGGATGGATGGATGAGTGGAGCCCAACACCAGCTCTCAGGTC
CTACGGAGGTGGCCTCTCTCAGCAGACGTTCATCTTCACTGACGGGGAAGATGAGGCCCTGGCCAGGCACACGGGCAACG
TGGTCATCACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTATGACCGCTTCATC
GAGTCCGGCAGGAAGTGGTTCTGCCACGTGGACGATGACAACTACGTCAACCTGCGGGCCCTGCTGCGGCTGCTGGCCAG
CTACCCGCACACGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGTCAGCGAGA
ACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCACGGGCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTCTGAAGATG
AGCCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGCGGATCCGGCTGCCTGATGACTGCACCATCGGCTACAT
CATGGAGGCCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCTTCCACTCCCACCTGGAGAACCTGCAGCAGGTGCCCA
CCTCGGAGCTCCACGAGCAGGTGACGCTGAGCTACGGTATGTTTGAAAACAAGCGGAACGCCGTCCACGTGAAGGGGCCC
TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGTACCCGGACACACCCTGGTGTCCCCGCAC
TGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
TGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTGCGTGTGCGTGTGTGTGTGTGTGTACTGCA
TGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGCTC
CGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGGA
TTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTG
ACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGAGC
CATGCTCACTGCAGGGGAGGCTGGGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGGCCTGGACGCTGTGGCTTAAG
AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTGGCA
CCCCTCCCAGCTCTTCTGAGTGGGGAGTCTTCCAGGCCTCCTCAGAGGTCTTCCCTTTGCCTCCCCAGGACAGGGTGAGT
CAGAGCTCAGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGACAGT
ATTTTTTTACTGTGCTGTTTTTTTTGAAAGGGGATGGGTAAAAAGTAGGGTGTTCTTGTTTTTTGCTTGGGAGGGTGGGG
GTGGGGGAGGGTCTTATTTTATCTTATCTTCTCTGTGGATCAGAAAAAACAGAAGCCAAACTCGGGGTCATCTTTGTTTT
TAAAGCTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCCATCCCTGCCCTCCTCC
TGTGTAGCTGCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTTTTCTCTTTG
CAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGACGTCCTTT
TGCTGTGAATAAAGGTGCTCTTTGCAGC

>T02828 Gene_ID:GA0179,Symbol:LFNG_transcript_variant_2,Class:Known_Gene,BaseSeq:AF193612.1
CGCGCCCCTGGCCGAGCCGCTCGCGCCCCGAGACGTCTTCATCGCTGTCAAGACCACCAAAAAGTTCCACCGCGCGCGCC
TCGACCTGCTGCTGGAGACCTGGATCTCGCGCCACAAGGAGATGACGTTCATCTTCACTGACGGGGAAGATGAGGCCCTG
GCCAGGCACACGGGCAACGTGGTCATCACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAAGATGGCCGT
GGAGTATGACCGCTTCATCGAGTCCGGCAGGAAGTGGTTCTGCCACGTGGACGATGACAACTACGTCAACCTGCGGGCCC
TGCTGCGGCTGCTGGCCAGCTACCCGCACACGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCATCCAGGCC
ATGGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCACGGGCGGCGCTGGCTTCTGCATCAGCCG
TGGGCTGGCTCTGAAGATGAGCCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGCGGATCCGGCTGCCTGATG
ACTGCACCATCGGCTACATCGTGGAGGCCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCTTCCACTCCCACCTGGAG
AACCTGCAGCAGGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCTGAGCTACGGTATGTTTGAAAACAAGCGGAACGC
CGTCCACGTGAAGGGGCCCTTCTCGGTGGAGGCCGACCCATCCAGGTGGGGAAACTGAGGCACGGAGCAGCTGATGCCCA
AGGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAG
CTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCCAGGCCCCGACCCCGCTCAGGGGTGGTGGGAAGAGTCCTGGA
GAGCAGGAGCAGTGCCGGAGCCCCCACTGCAGCTGGTCCCAGCCCCTGCAGAGATCCAGACGCTTGTTTTTTAAATACAG
CAGCTCTGCGGTGCTTTTCCTTCCTCA

Note: Some data originated from NCBI's LocusLink.